Programmable energy landscapes for kinetic control of DNA strand displacement.

Programmable energy landscapes for kinetic control of DNA strand displacement.

DNA is used to construct synthetic systems that sense, actuate, move and compute. The operation of many dynamic DNA devices depends on toehold-mediated strand displacement, by which one DNA strand displaces another from a duplex. Kinetic control of strand displacement is particularly important in au...

Descripció completa

Dades bibliogràfiques
Autors principals:	Machinek, R, Ouldridge, T, Haley, N, Bath, J, Turberfield, A
Format:	Journal article
Idioma:	English
Publicat:	Nature Publishing Group 2014

Ítems similars

Design of hidden thermodynamic driving for non-equilibrium systems via mismatch elimination during DNA strand displacement
per: Haley, NEC, et al.
Publicat: (2020)

On the biophysics and kinetics of toehold-mediated DNA strand displacement
per: Srinivas, N, et al.
Publicat: (2013)

Combinatorial displacement of DNA strands: application to matrix multiplication and weighted sums.
per: Genot, A, et al.
Publicat: (2013)

A cascade of DNA strand displacements using toehold-mediated exchange
per: Lally, P, et al.
Publicat: (2010)

DNA hybridization kinetics: zippering, internal displacement and sequence dependence.
per: Ouldridge, T, et al.
Publicat: (2013)

Modelling toehold-mediated RNA strand displacement
per: Šulc, P, et al.
Publicat: (2015)

Remote toehold: A mechanism for flexible control of DNA hybridization kinetics
per: Genot, A, et al.
Publicat: (2011)

Remote toehold: a mechanism for flexible control of DNA hybridization kinetics.
per: Genot, A, et al.
Publicat: (2011)

Optimizing DNA nanotechnology through coarse-grained modeling: a two-footed DNA walker.
per: Ouldridge, T, et al.
Publicat: (2013)

Control and observation of DNA nanodevices
per: Machinek, R, et al.
Publicat: (2014)

Guiding the folding pathway of DNA origami.
per: Dunn, K, et al.
Publicat: (2015)

Two-Domain DNA Strand Displacement
per: Luca Cardelli
Publicat: (2010-06-01)

Modelling DNA origami self-assembly at the domain level.
per: Dannenberg, F, et al.
Publicat: (2015)

Guiding the folding pathway of DNA origami
per: Dunn, KE, et al.
Publicat: (2015)

Modelling DNA origami self-assembly at the domain level
per: Dannenberg, F, et al.
Publicat: (2015)

An Operational DNA Strand Displacement Encryption Approach
per: Enqiang Zhu, et al.
Publicat: (2022-03-01)

Logical Reasoning Based on DNA Strand Displacement
per: WU Li-bo, HUANG Yu-fang
Publicat: (2022-01-01)

A DNA molecular printer capable of programmable positioning and patterning in two dimensions
per: Benson, E, et al.
Publicat: (2022)

A programmable molecular robot.
per: Muscat, R, et al.
Publicat: (2011)

DNA strand displacement based computational systems and their applications
per: Congzhou Chen, et al.
Publicat: (2023-02-01)

Double Synchronization Based on DNA Strand Displacement Reaction
per: Junwei Sun, et al.
Publicat: (2020-01-01)

Four-Analog Computation Based on DNA Strand Displacement
per: Chengye Zou, et al.
Publicat: (2017-08-01)

DNA nanomachines.
per: Bath, J, et al.
Publicat: (2007)

Sequential super-resolution imaging using DNA strand displacement.
per: Sandeep Pallikkuth, et al.
Publicat: (2018-01-01)

Kinetically controlled self-assembly of DNA oligomers.
per: Lubrich, D, et al.
Publicat: (2009)

Programmable one-pot multistep organic synthesis using DNA junctions.
per: McKee, M, et al.
Publicat: (2012)

The effect of topology on the structure and free energy landscape of DNA kissing complexes.
per: Romano, F, et al.
Publicat: (2012)

DNA Logic Multiplexing Using Toehold-Mediated Strand Displacement
per: Congzhou Chen, et al.
Publicat: (2020-01-01)

A novel bio-sensor based on DNA strand displacement.
per: Xiaolong Shi, et al.
Publicat: (2014-01-01)

DNA Nanotechnology in the Undergraduate Laboratory: Toehold-Less Strand Displacement in Switchback DNA
per: Bharath Raj Madhanagopal, et al.
Publicat: (2025-01-01)

Molecular machinery built from DNA
per: Bath, J, et al.
Publicat: (2013)

Quantitative Analysis of the Effect of Fluorescent Labels on DNA Strand Displacement Reaction
per: Masato Toyonari, et al.
Publicat: (2024-11-01)

Matrix-Chain Multiplication Based on Combinatorial Allosteric DNA Strand Displacement
per: Hengyan Guo, et al.
Publicat: (2024-01-01)

Nucleic acid strand displacement – from DNA nanotechnology to translational regulation
per: Friedrich C. Simmel
Publicat: (2023-12-01)

Three-input logic gate based on DNA strand displacement reaction
per: M. A. Jingjing
Publicat: (2023-09-01)

Chimeric DNA byproducts in strand displacement amplification using the T7 replisome
per: Dillon B. Nye, et al.
Publicat: (2022-01-01)

Chimeric DNA byproducts in strand displacement amplification using the T7 replisome.
per: Dillon B Nye, et al.
Publicat: (2022-01-01)

Isothermal amplification of long DNA fragments at low temperature by improved strand displacement amplification
per: Yinhua Zhang, et al.
Publicat: (2024-06-01)

A Novel Computational Method to Reduce Leaky Reaction in DNA Strand Displacement
per: Xin Li, et al.
Publicat: (2015-01-01)

A Geometrical Allosteric DNA Switch
per: Genot, A, et al.
Publicat: (2010)