Uphoff 2018 PNAS: Real-time dynamics of mutagenesis reveal the chronology of DNA repair and damage tolerance responses in single cells
The data are described in the article “Real-time dynamics of mutagenesis reveal the chronology of DNA repair and damage tolerance responses in single cells”. The file names are composed of the strain name (see paper supplementary information) and the drug treatment specific to each experiment. Data...
| Egile nagusia: | |
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| Formatua: | Dataset |
| Argitaratua: |
University of Oxford
2018
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| _version_ | 1826303129391464448 |
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| author | Uphoff, S |
| author2 | Uphoff, S |
| author_facet | Uphoff, S Uphoff, S |
| author_sort | Uphoff, S |
| collection | OXFORD |
| description | The data are described in the article “Real-time dynamics of mutagenesis reveal the chronology of DNA repair and damage tolerance responses in single cells”.
The file names are composed of the strain name (see paper supplementary information) and the drug treatment specific to each experiment.
Data are in MATLAB struct array format (.mat) with a separate line for each field of view.
Each line is a struct array containing the following fields for each cell in the field of view:
frames: frame indices
drugTreatment: 1 for frames with drug treatment, 0 otherwise
cellLength: segmented cell length in pixels
cellArea: segmented cell area in pixels
cellDivision: frame indices for cell division events
CFP: average CFP (CFP3A) pixel intensity within segmented cell area (a.u.).
YFP: average YFP (mYPet) pixel intensity within segmented cell area (a.u.)
mCherry: average mCherry (mKate2) pixel intensity within segmented cell area (a.u.)
foci: 1 for frames with a new MutL-mYPet focus, 0 otherwise |
| first_indexed | 2024-03-07T05:57:57Z |
| format | Dataset |
| id | oxford-uuid:eb2c482c-dd82-4618-994e-d6c59f0379eb |
| institution | University of Oxford |
| last_indexed | 2024-03-07T05:57:57Z |
| publishDate | 2018 |
| publisher | University of Oxford |
| record_format | dspace |
| spelling | oxford-uuid:eb2c482c-dd82-4618-994e-d6c59f0379eb2022-03-27T11:07:51ZUphoff 2018 PNAS: Real-time dynamics of mutagenesis reveal the chronology of DNA repair and damage tolerance responses in single cellsDatasethttp://purl.org/coar/resource_type/c_ddb1uuid:eb2c482c-dd82-4618-994e-d6c59f0379ebORA DepositUniversity of Oxford2018Uphoff, SUphoff, SThe data are described in the article “Real-time dynamics of mutagenesis reveal the chronology of DNA repair and damage tolerance responses in single cells”. The file names are composed of the strain name (see paper supplementary information) and the drug treatment specific to each experiment. Data are in MATLAB struct array format (.mat) with a separate line for each field of view. Each line is a struct array containing the following fields for each cell in the field of view: frames: frame indices drugTreatment: 1 for frames with drug treatment, 0 otherwise cellLength: segmented cell length in pixels cellArea: segmented cell area in pixels cellDivision: frame indices for cell division events CFP: average CFP (CFP3A) pixel intensity within segmented cell area (a.u.). YFP: average YFP (mYPet) pixel intensity within segmented cell area (a.u.) mCherry: average mCherry (mKate2) pixel intensity within segmented cell area (a.u.) foci: 1 for frames with a new MutL-mYPet focus, 0 otherwise |
| spellingShingle | Uphoff, S Uphoff 2018 PNAS: Real-time dynamics of mutagenesis reveal the chronology of DNA repair and damage tolerance responses in single cells |
| title | Uphoff 2018 PNAS: Real-time dynamics of mutagenesis reveal the chronology of DNA repair and damage tolerance responses in single cells |
| title_full | Uphoff 2018 PNAS: Real-time dynamics of mutagenesis reveal the chronology of DNA repair and damage tolerance responses in single cells |
| title_fullStr | Uphoff 2018 PNAS: Real-time dynamics of mutagenesis reveal the chronology of DNA repair and damage tolerance responses in single cells |
| title_full_unstemmed | Uphoff 2018 PNAS: Real-time dynamics of mutagenesis reveal the chronology of DNA repair and damage tolerance responses in single cells |
| title_short | Uphoff 2018 PNAS: Real-time dynamics of mutagenesis reveal the chronology of DNA repair and damage tolerance responses in single cells |
| title_sort | uphoff 2018 pnas real time dynamics of mutagenesis reveal the chronology of dna repair and damage tolerance responses in single cells |
| work_keys_str_mv | AT uphoffs uphoff2018pnasrealtimedynamicsofmutagenesisrevealthechronologyofdnarepairanddamagetoleranceresponsesinsinglecells |