Genome-wide analysis of genetic susceptibility to language impairment in an isolated Chilean population

Specific language impairment (SLI) is an unexpected deficit in the acquisition of language skills and affects between 5 and 8% of pre-school children. Despite its prevalence and high heritability, our understanding of the aetiology of this disorder is only emerging. In this paper, we apply genome-wi...

Full description

Bibliographic Details
Main Authors: Villanueva, P, Newbury, D, Jara, L, De Barbieri, Z, Mirza, G, Palamino, H, Fernández, M, Cazier, J, Monaco, A, Palomino, H
Format: Journal article
Language:English
Published: 2011
_version_ 1826306206217535488
author Villanueva, P
Newbury, D
Jara, L
De Barbieri, Z
Mirza, G
Palamino, H
Fernández, M
Cazier, J
Monaco, A
Palomino, H
author_facet Villanueva, P
Newbury, D
Jara, L
De Barbieri, Z
Mirza, G
Palamino, H
Fernández, M
Cazier, J
Monaco, A
Palomino, H
author_sort Villanueva, P
collection OXFORD
description Specific language impairment (SLI) is an unexpected deficit in the acquisition of language skills and affects between 5 and 8% of pre-school children. Despite its prevalence and high heritability, our understanding of the aetiology of this disorder is only emerging. In this paper, we apply genome-wide techniques to investigate an isolated Chilean population who exhibit an increased frequency of SLI. Loss of heterozygosity (LOH) mapping and parametric and non-parametric linkage analyses indicate that complex genetic factors are likely to underlie susceptibility to SLI in this population. Across all analyses performed, the most consistently implicated locus was on chromosome 7q. This locus achieved highly significant linkage under all three non-parametric models (max NPL6.73, P4.0 × 10 11). In addition, it yielded a HLOD of 1.24 in the recessive parametric linkage analyses and contained a segment that was homozygous in two affected individuals. Further, investigation of this region identified a two-SNP haplotype that occurs at an increased frequency in language-impaired individuals (P0.008). We hypothesise that the linkage regions identified here, in particular that on chromosome 7, may contain variants that underlie the high prevalence of SLI observed in this isolated population and may be of relevance to other populations affected by language impairments. © 2011 Macmillan Publishers Limited All rights reserved.
first_indexed 2024-03-07T06:44:25Z
format Journal article
id oxford-uuid:fa610c8c-cfc6-4cbf-9cfe-f85760ac1ef7
institution University of Oxford
language English
last_indexed 2024-03-07T06:44:25Z
publishDate 2011
record_format dspace
spelling oxford-uuid:fa610c8c-cfc6-4cbf-9cfe-f85760ac1ef72022-03-27T13:05:23ZGenome-wide analysis of genetic susceptibility to language impairment in an isolated Chilean populationJournal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:fa610c8c-cfc6-4cbf-9cfe-f85760ac1ef7EnglishSymplectic Elements at Oxford2011Villanueva, PNewbury, DJara, LDe Barbieri, ZMirza, GPalamino, HFernández, MCazier, JMonaco, APalomino, HSpecific language impairment (SLI) is an unexpected deficit in the acquisition of language skills and affects between 5 and 8% of pre-school children. Despite its prevalence and high heritability, our understanding of the aetiology of this disorder is only emerging. In this paper, we apply genome-wide techniques to investigate an isolated Chilean population who exhibit an increased frequency of SLI. Loss of heterozygosity (LOH) mapping and parametric and non-parametric linkage analyses indicate that complex genetic factors are likely to underlie susceptibility to SLI in this population. Across all analyses performed, the most consistently implicated locus was on chromosome 7q. This locus achieved highly significant linkage under all three non-parametric models (max NPL6.73, P4.0 × 10 11). In addition, it yielded a HLOD of 1.24 in the recessive parametric linkage analyses and contained a segment that was homozygous in two affected individuals. Further, investigation of this region identified a two-SNP haplotype that occurs at an increased frequency in language-impaired individuals (P0.008). We hypothesise that the linkage regions identified here, in particular that on chromosome 7, may contain variants that underlie the high prevalence of SLI observed in this isolated population and may be of relevance to other populations affected by language impairments. © 2011 Macmillan Publishers Limited All rights reserved.
spellingShingle Villanueva, P
Newbury, D
Jara, L
De Barbieri, Z
Mirza, G
Palamino, H
Fernández, M
Cazier, J
Monaco, A
Palomino, H
Genome-wide analysis of genetic susceptibility to language impairment in an isolated Chilean population
title Genome-wide analysis of genetic susceptibility to language impairment in an isolated Chilean population
title_full Genome-wide analysis of genetic susceptibility to language impairment in an isolated Chilean population
title_fullStr Genome-wide analysis of genetic susceptibility to language impairment in an isolated Chilean population
title_full_unstemmed Genome-wide analysis of genetic susceptibility to language impairment in an isolated Chilean population
title_short Genome-wide analysis of genetic susceptibility to language impairment in an isolated Chilean population
title_sort genome wide analysis of genetic susceptibility to language impairment in an isolated chilean population
work_keys_str_mv AT villanuevap genomewideanalysisofgeneticsusceptibilitytolanguageimpairmentinanisolatedchileanpopulation
AT newburyd genomewideanalysisofgeneticsusceptibilitytolanguageimpairmentinanisolatedchileanpopulation
AT jaral genomewideanalysisofgeneticsusceptibilitytolanguageimpairmentinanisolatedchileanpopulation
AT debarbieriz genomewideanalysisofgeneticsusceptibilitytolanguageimpairmentinanisolatedchileanpopulation
AT mirzag genomewideanalysisofgeneticsusceptibilitytolanguageimpairmentinanisolatedchileanpopulation
AT palaminoh genomewideanalysisofgeneticsusceptibilitytolanguageimpairmentinanisolatedchileanpopulation
AT fernandezm genomewideanalysisofgeneticsusceptibilitytolanguageimpairmentinanisolatedchileanpopulation
AT cazierj genomewideanalysisofgeneticsusceptibilitytolanguageimpairmentinanisolatedchileanpopulation
AT monacoa genomewideanalysisofgeneticsusceptibilitytolanguageimpairmentinanisolatedchileanpopulation
AT palominoh genomewideanalysisofgeneticsusceptibilitytolanguageimpairmentinanisolatedchileanpopulation