The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage
In 2019, 10 million new cases of tuberculosis have been reported worldwide. Our data reports genetic analyses of a Mycobacterium tuberculosis strain SBH321 isolated from a 31-year-old female with pulmonary tuberculosis. The genomic DNA of the strain was extracted from pure culture and subjected to s...
| _version_ | 1796910847805620224 |
|---|---|
| author | Jaeyres Jani Zainal Arifin Mustapha Chin, Kai Ling Amabel Seow Ming Hui Roddy Teo Kamruddin Ahmed |
| author_facet | Jaeyres Jani Zainal Arifin Mustapha Chin, Kai Ling Amabel Seow Ming Hui Roddy Teo Kamruddin Ahmed |
| author_sort | Jaeyres Jani |
| collection | UMS |
| description | In 2019, 10 million new cases of tuberculosis have been reported worldwide. Our data reports genetic analyses of a Mycobacterium tuberculosis strain SBH321 isolated from a 31-year-old female with pulmonary tuberculosis. The genomic DNA of the strain was extracted from pure culture and subjected to sequencing using Illumina platform. M. tuberculosis strain SBH321 consists of 4,374,895 bp with G+C content of 65.59%. The comparative analysis by SNP-based phylogenetic analysis using maximum-likelihood method showed that our strain belonging to sub lineage of the Ural family of Europe–America–Africa lineage (Lineage 4) and clustered with M. tuberculosis strain OFXR-4 from Taiwan. |
| first_indexed | 2024-03-06T03:10:23Z |
| format | Article |
| id | ums.eprints-30366 |
| institution | Universiti Malaysia Sabah |
| language | English English |
| last_indexed | 2024-03-06T03:10:23Z |
| publishDate | 2020 |
| publisher | Elsevier Inc. |
| record_format | dspace |
| spelling | ums.eprints-303662021-08-21T09:10:10Z https://eprints.ums.edu.my/id/eprint/30366/ The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage Jaeyres Jani Zainal Arifin Mustapha Chin, Kai Ling Amabel Seow Ming Hui Roddy Teo Kamruddin Ahmed RC306-320.5 Tuberculosis In 2019, 10 million new cases of tuberculosis have been reported worldwide. Our data reports genetic analyses of a Mycobacterium tuberculosis strain SBH321 isolated from a 31-year-old female with pulmonary tuberculosis. The genomic DNA of the strain was extracted from pure culture and subjected to sequencing using Illumina platform. M. tuberculosis strain SBH321 consists of 4,374,895 bp with G+C content of 65.59%. The comparative analysis by SNP-based phylogenetic analysis using maximum-likelihood method showed that our strain belonging to sub lineage of the Ural family of Europe–America–Africa lineage (Lineage 4) and clustered with M. tuberculosis strain OFXR-4 from Taiwan. Elsevier Inc. 2020 Article PeerReviewed text en https://eprints.ums.edu.my/id/eprint/30366/1/The%20whole%20genome%20sequence%20data%20analyses%20of%20a%20Mycobacterium%20tuberculosis%20strain%20SBH321%20isolated%20in%20Sabah%2C%20Malaysia%2C%20belongs%20to%20Ural%20family%20of%20Lineage%204sigmoid%20colon.pdf text en https://eprints.ums.edu.my/id/eprint/30366/2/The%20whole%20genome%20sequence%20data%20analyses%20of%20a%20Mycobacterium%20tuberculosis%20strain%20SBH321%20isolated%20in%20Sabah%2C%20Malaysia%2C%20belongs%20to%20Ural%20family%20of%20Lineage%204sigmoid%20colon1.pdf Jaeyres Jani and Zainal Arifin Mustapha and Chin, Kai Ling and Amabel Seow Ming Hui and Roddy Teo and Kamruddin Ahmed (2020) The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage. Data in Brief, 33. pp. 1-6. ISSN 2352-3409 https://www.researchgate.net/publication/344634667_The_whole_genome_sequence_data_analyses_of_a_Mycobacterium_tuberculosis_strain_SBH321_isolated_in_Sabah_Malaysia_belongs_to_Ural_family_of_Lineage_4 https://doi.org/10.1016/j.dib.2020.106388 https://doi.org/10.1016/j.dib.2020.106388 |
| spellingShingle | RC306-320.5 Tuberculosis Jaeyres Jani Zainal Arifin Mustapha Chin, Kai Ling Amabel Seow Ming Hui Roddy Teo Kamruddin Ahmed The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage |
| title | The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage |
| title_full | The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage |
| title_fullStr | The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage |
| title_full_unstemmed | The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage |
| title_short | The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage |
| title_sort | whole genome sequence data analyses of a mycobacterium tuberculosis strain sbh321 isolated in sabah malaysia belongs to ural family of lineage |
| topic | RC306-320.5 Tuberculosis |
| url | https://eprints.ums.edu.my/id/eprint/30366/1/The%20whole%20genome%20sequence%20data%20analyses%20of%20a%20Mycobacterium%20tuberculosis%20strain%20SBH321%20isolated%20in%20Sabah%2C%20Malaysia%2C%20belongs%20to%20Ural%20family%20of%20Lineage%204sigmoid%20colon.pdf https://eprints.ums.edu.my/id/eprint/30366/2/The%20whole%20genome%20sequence%20data%20analyses%20of%20a%20Mycobacterium%20tuberculosis%20strain%20SBH321%20isolated%20in%20Sabah%2C%20Malaysia%2C%20belongs%20to%20Ural%20family%20of%20Lineage%204sigmoid%20colon1.pdf |
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