Genomic data of leptospira interrogans hp358 isolated from rodent captured from the human leptospirosis suspected areas of Selangor state, Malaysia

The data provided in this article is the genomic sequence of new Leptospira isolate, Leptospira interrogans strain HP358 ( L. interrogans HP358) isolated from rodent, Sundamys muel- leri (S. muelleri) , captured from the human leptospirosis sus- pected area, in forest environment, Hulu Perdik, Selan...

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Главные авторы: Noraini Philip, Jaeyres Jani, Nurul Natasya Azhari, Zamberi Sekawi, Vasantha Kumari Neela
Формат: Статья
Язык:English
English
Опубликовано: Elsevier Inc. 2021
Предметы:
Online-ссылка:https://eprints.ums.edu.my/id/eprint/30673/1/Genomic%20data%20of%20leptospira%20interrogans%20hp358%20isolated%20from%20rodent%20captured%20from%20the%20human%20leptospirosis%20suspected%20areas%20of%20Selangor%20state%2C%20Malaysia-Abstract.pdf
https://eprints.ums.edu.my/id/eprint/30673/2/Genomic%20data%20of%20Leptospira%20interrogans%20HP358%20isolated%20from%20rodent%20captured%20from%20the%20human%20leptospirosis%20suspected%20areas%20of%20Selangor%20state%2C%20Malaysia.pdf
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author Noraini Philip
Jaeyres Jani
Nurul Natasya Azhari
Zamberi Sekawi
Vasantha Kumari Neela
author_facet Noraini Philip
Jaeyres Jani
Nurul Natasya Azhari
Zamberi Sekawi
Vasantha Kumari Neela
author_sort Noraini Philip
collection UMS
description The data provided in this article is the genomic sequence of new Leptospira isolate, Leptospira interrogans strain HP358 ( L. interrogans HP358) isolated from rodent, Sundamys muel- leri (S. muelleri) , captured from the human leptospirosis sus- pected area, in forest environment, Hulu Perdik, Selangor. The kidney of the rodent was cultured, and the genomic DNA of pure Leptospira isolate was extracted and sequenced. The de novo assembly of genome generated 118 contigs with N50 of 133,176bp. The genome size of the L. interrogans HP358 was determined with a length of 4,808,724 and 35.01% G + C content with 229 subsystems, 5236 coding sequences and 39 RNAs. The whole genome shotgun project has been de- posited in NCBI GenBank under the accession number JAF- CYY0 0 0 0 0 0 0 0 0.1.
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spelling ums.eprints-306732023-05-19T02:58:44Z https://eprints.ums.edu.my/id/eprint/30673/ Genomic data of leptospira interrogans hp358 isolated from rodent captured from the human leptospirosis suspected areas of Selangor state, Malaysia Noraini Philip Jaeyres Jani Nurul Natasya Azhari Zamberi Sekawi Vasantha Kumari Neela QR1-502 Microbiology RA1-1270 Public aspects of medicine The data provided in this article is the genomic sequence of new Leptospira isolate, Leptospira interrogans strain HP358 ( L. interrogans HP358) isolated from rodent, Sundamys muel- leri (S. muelleri) , captured from the human leptospirosis sus- pected area, in forest environment, Hulu Perdik, Selangor. The kidney of the rodent was cultured, and the genomic DNA of pure Leptospira isolate was extracted and sequenced. The de novo assembly of genome generated 118 contigs with N50 of 133,176bp. The genome size of the L. interrogans HP358 was determined with a length of 4,808,724 and 35.01% G + C content with 229 subsystems, 5236 coding sequences and 39 RNAs. The whole genome shotgun project has been de- posited in NCBI GenBank under the accession number JAF- CYY0 0 0 0 0 0 0 0 0.1. Elsevier Inc. 2021-07-10 Article PeerReviewed text en https://eprints.ums.edu.my/id/eprint/30673/1/Genomic%20data%20of%20leptospira%20interrogans%20hp358%20isolated%20from%20rodent%20captured%20from%20the%20human%20leptospirosis%20suspected%20areas%20of%20Selangor%20state%2C%20Malaysia-Abstract.pdf text en https://eprints.ums.edu.my/id/eprint/30673/2/Genomic%20data%20of%20Leptospira%20interrogans%20HP358%20isolated%20from%20rodent%20captured%20from%20the%20human%20leptospirosis%20suspected%20areas%20of%20Selangor%20state%2C%20Malaysia.pdf Noraini Philip and Jaeyres Jani and Nurul Natasya Azhari and Zamberi Sekawi and Vasantha Kumari Neela (2021) Genomic data of leptospira interrogans hp358 isolated from rodent captured from the human leptospirosis suspected areas of Selangor state, Malaysia. Data in Brief. pp. 1-4. ISSN 2352-3409 https://reader.elsevier.com/reader/sd/pii/S235234092100545X?token=B6864E1B76D282F3B1AB67E4F70DB2FB6103E0BBF733BA1967758C48569944D6109ADCED8A9F97677DE301048DE4D40C&originRegion=eu-west-1&originCreation=20210826081552
spellingShingle QR1-502 Microbiology
RA1-1270 Public aspects of medicine
Noraini Philip
Jaeyres Jani
Nurul Natasya Azhari
Zamberi Sekawi
Vasantha Kumari Neela
Genomic data of leptospira interrogans hp358 isolated from rodent captured from the human leptospirosis suspected areas of Selangor state, Malaysia
title Genomic data of leptospira interrogans hp358 isolated from rodent captured from the human leptospirosis suspected areas of Selangor state, Malaysia
title_full Genomic data of leptospira interrogans hp358 isolated from rodent captured from the human leptospirosis suspected areas of Selangor state, Malaysia
title_fullStr Genomic data of leptospira interrogans hp358 isolated from rodent captured from the human leptospirosis suspected areas of Selangor state, Malaysia
title_full_unstemmed Genomic data of leptospira interrogans hp358 isolated from rodent captured from the human leptospirosis suspected areas of Selangor state, Malaysia
title_short Genomic data of leptospira interrogans hp358 isolated from rodent captured from the human leptospirosis suspected areas of Selangor state, Malaysia
title_sort genomic data of leptospira interrogans hp358 isolated from rodent captured from the human leptospirosis suspected areas of selangor state malaysia
topic QR1-502 Microbiology
RA1-1270 Public aspects of medicine
url https://eprints.ums.edu.my/id/eprint/30673/1/Genomic%20data%20of%20leptospira%20interrogans%20hp358%20isolated%20from%20rodent%20captured%20from%20the%20human%20leptospirosis%20suspected%20areas%20of%20Selangor%20state%2C%20Malaysia-Abstract.pdf
https://eprints.ums.edu.my/id/eprint/30673/2/Genomic%20data%20of%20Leptospira%20interrogans%20HP358%20isolated%20from%20rodent%20captured%20from%20the%20human%20leptospirosis%20suspected%20areas%20of%20Selangor%20state%2C%20Malaysia.pdf
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