Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas
This paper reports on the complete mitochondrial (mt) genome of a horseshoe crab, Tachypleus gigas (T. gigas), in Kuala Kemaman, Terengganu, Malaysia. Whole-genome sequencing of hemocyte DNA was performed with Illumina HiSeq system and the generated reads were de novo assembled with ABySS 2.1.5 and...
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| Format: | Article |
| Language: | English English |
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Taylor & Francis Group
2021
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| Subjects: | |
| Online Access: | https://eprints.ums.edu.my/id/eprint/34642/1/Abstract.pdf https://eprints.ums.edu.my/id/eprint/34642/2/Full%20text.pdf |
| _version_ | 1796911629071286272 |
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| author | Maria E. Sarmiento Chin, Kai Ling Lau, Nyok Sean Ismail Aziah Mohd Nor Norazmi Armando Acosta Noraznawati Ismail Nik Soriani Yaacob |
| author_facet | Maria E. Sarmiento Chin, Kai Ling Lau, Nyok Sean Ismail Aziah Mohd Nor Norazmi Armando Acosta Noraznawati Ismail Nik Soriani Yaacob |
| author_sort | Maria E. Sarmiento |
| collection | UMS |
| description | This paper reports on the complete mitochondrial (mt) genome of a horseshoe crab, Tachypleus gigas (T. gigas), in Kuala Kemaman, Terengganu, Malaysia. Whole-genome sequencing of hemocyte DNA was performed with Illumina HiSeq system and the generated reads were de novo assembled with ABySS 2.1.5 and reassembled using mitoZ against Carcinoscorpius rotundicauda and Limulus polyphemus, resulting in a contig of 15 Kb. Phylogenetic analysis of the assembled mt genome suggests that the Tachypleus gigas is closely related to Tachypleus tridentatus than to Carcinoscorpius rotundicauda. |
| first_indexed | 2024-03-06T03:21:31Z |
| format | Article |
| id | ums.eprints-34642 |
| institution | Universiti Malaysia Sabah |
| language | English English |
| last_indexed | 2024-03-06T03:21:31Z |
| publishDate | 2021 |
| publisher | Taylor & Francis Group |
| record_format | dspace |
| spelling | ums.eprints-346422022-10-31T01:20:35Z https://eprints.ums.edu.my/id/eprint/34642/ Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas Maria E. Sarmiento Chin, Kai Ling Lau, Nyok Sean Ismail Aziah Mohd Nor Norazmi Armando Acosta Noraznawati Ismail Nik Soriani Yaacob QL750-795 Animal behavior SH20.3-191 Aquaculture This paper reports on the complete mitochondrial (mt) genome of a horseshoe crab, Tachypleus gigas (T. gigas), in Kuala Kemaman, Terengganu, Malaysia. Whole-genome sequencing of hemocyte DNA was performed with Illumina HiSeq system and the generated reads were de novo assembled with ABySS 2.1.5 and reassembled using mitoZ against Carcinoscorpius rotundicauda and Limulus polyphemus, resulting in a contig of 15 Kb. Phylogenetic analysis of the assembled mt genome suggests that the Tachypleus gigas is closely related to Tachypleus tridentatus than to Carcinoscorpius rotundicauda. Taylor & Francis Group 2021 Article PeerReviewed text en https://eprints.ums.edu.my/id/eprint/34642/1/Abstract.pdf text en https://eprints.ums.edu.my/id/eprint/34642/2/Full%20text.pdf Maria E. Sarmiento and Chin, Kai Ling and Lau, Nyok Sean and Ismail Aziah and Mohd Nor Norazmi and Armando Acosta and Noraznawati Ismail and Nik Soriani Yaacob (2021) Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas. Mitochondrial DNA Part B Resources, 6. pp. 1710-1714. ISSN 2380-2359 https://www.tandfonline.com/doi/full/10.1080/23802359.2021.1930213 https://doi.org/10.1080/23802359.2021.1930213 https://doi.org/10.1080/23802359.2021.1930213 |
| spellingShingle | QL750-795 Animal behavior SH20.3-191 Aquaculture Maria E. Sarmiento Chin, Kai Ling Lau, Nyok Sean Ismail Aziah Mohd Nor Norazmi Armando Acosta Noraznawati Ismail Nik Soriani Yaacob Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas |
| title | Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas |
| title_full | Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas |
| title_fullStr | Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas |
| title_full_unstemmed | Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas |
| title_short | Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas |
| title_sort | mitochondrial dna sequence of the horseshoe crab tachypleus gigas |
| topic | QL750-795 Animal behavior SH20.3-191 Aquaculture |
| url | https://eprints.ums.edu.my/id/eprint/34642/1/Abstract.pdf https://eprints.ums.edu.my/id/eprint/34642/2/Full%20text.pdf |
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