Opportunistic sampling of yellow canary (Crithagra flaviventris) has revealed a high genetic diversity of detected parvoviral sequences
Parvoviruses are known to be significant viral pathogens that infect a wide range of species globally. However, little is known about the parvoviruses circulating in Australian birds, including yellow canaries. Here, we present four parvoviral sequences including three novel parvoviruses detected fr...
| Main Authors: | , , , , |
|---|---|
| Format: | Article |
| Language: | English English |
| Published: |
Elsevier
2024
|
| Subjects: | |
| Online Access: | https://eprints.ums.edu.my/id/eprint/39448/1/ABSTRACT.pdf https://eprints.ums.edu.my/id/eprint/39448/2/FULL%20TEXT.pdf |
| _version_ | 1825715704660230144 |
|---|---|
| author | Yuhao Zhang Saranika Talukder Md Safiul Alam Bhuiyan Lei He Subir Sarker |
| author_facet | Yuhao Zhang Saranika Talukder Md Safiul Alam Bhuiyan Lei He Subir Sarker |
| author_sort | Yuhao Zhang |
| collection | UMS |
| description | Parvoviruses are known to be significant viral pathogens that infect a wide range of species globally. However, little is known about the parvoviruses circulating in Australian birds, including yellow canaries. Here, we present four parvoviral sequences including three novel parvoviruses detected from 10 yellow canaries (Crithagra flaviventris), named canary chaphamaparvovirus 1 and -2 (CaChPV1 and CaChPV2), canary dependoparvovirus 1 and -2 (CaDePV1 and CaDePV2). The whole genome sequences of CaChPV1, CaChPV2, CaDePV1, and CaDePV2 showed the highest identity with other parvoviruses at 76.4%, 75.9%, 84.0%, and 59.1%, respectively. Phylogenetic analysis demonstrated that CaChPV1 and CaChPV2 were clustered within the genus Chaphamaparvovirus. Meanwhile, CaDePV1 and CaDePV2 fall within the genus Dependoparvovirus and have the closest evolutionary relationship to the bird-associated dependoparvoviruses. Overall, this study enriched our understanding of the genetic diversity among avian parvoviruses within the Parvoviridae family. |
| first_indexed | 2024-09-24T00:51:04Z |
| format | Article |
| id | ums.eprints-39448 |
| institution | Universiti Malaysia Sabah |
| language | English English |
| last_indexed | 2024-09-24T00:51:04Z |
| publishDate | 2024 |
| publisher | Elsevier |
| record_format | dspace |
| spelling | ums.eprints-394482024-08-05T03:07:49Z https://eprints.ums.edu.my/id/eprint/39448/ Opportunistic sampling of yellow canary (Crithagra flaviventris) has revealed a high genetic diversity of detected parvoviral sequences Yuhao Zhang Saranika Talukder Md Safiul Alam Bhuiyan Lei He Subir Sarker QH301-705.5 Biology (General) QR355-502 Virology Parvoviruses are known to be significant viral pathogens that infect a wide range of species globally. However, little is known about the parvoviruses circulating in Australian birds, including yellow canaries. Here, we present four parvoviral sequences including three novel parvoviruses detected from 10 yellow canaries (Crithagra flaviventris), named canary chaphamaparvovirus 1 and -2 (CaChPV1 and CaChPV2), canary dependoparvovirus 1 and -2 (CaDePV1 and CaDePV2). The whole genome sequences of CaChPV1, CaChPV2, CaDePV1, and CaDePV2 showed the highest identity with other parvoviruses at 76.4%, 75.9%, 84.0%, and 59.1%, respectively. Phylogenetic analysis demonstrated that CaChPV1 and CaChPV2 were clustered within the genus Chaphamaparvovirus. Meanwhile, CaDePV1 and CaDePV2 fall within the genus Dependoparvovirus and have the closest evolutionary relationship to the bird-associated dependoparvoviruses. Overall, this study enriched our understanding of the genetic diversity among avian parvoviruses within the Parvoviridae family. Elsevier 2024 Article NonPeerReviewed text en https://eprints.ums.edu.my/id/eprint/39448/1/ABSTRACT.pdf text en https://eprints.ums.edu.my/id/eprint/39448/2/FULL%20TEXT.pdf Yuhao Zhang and Saranika Talukder and Md Safiul Alam Bhuiyan and Lei He and Subir Sarker (2024) Opportunistic sampling of yellow canary (Crithagra flaviventris) has revealed a high genetic diversity of detected parvoviral sequences. Sciencedirect, 595. pp. 1-8. ISSN 2352-3409 https://doi.org/10.1016/j.virol.2024.110081 |
| spellingShingle | QH301-705.5 Biology (General) QR355-502 Virology Yuhao Zhang Saranika Talukder Md Safiul Alam Bhuiyan Lei He Subir Sarker Opportunistic sampling of yellow canary (Crithagra flaviventris) has revealed a high genetic diversity of detected parvoviral sequences |
| title | Opportunistic sampling of yellow canary (Crithagra flaviventris) has revealed a high genetic diversity of detected parvoviral sequences |
| title_full | Opportunistic sampling of yellow canary (Crithagra flaviventris) has revealed a high genetic diversity of detected parvoviral sequences |
| title_fullStr | Opportunistic sampling of yellow canary (Crithagra flaviventris) has revealed a high genetic diversity of detected parvoviral sequences |
| title_full_unstemmed | Opportunistic sampling of yellow canary (Crithagra flaviventris) has revealed a high genetic diversity of detected parvoviral sequences |
| title_short | Opportunistic sampling of yellow canary (Crithagra flaviventris) has revealed a high genetic diversity of detected parvoviral sequences |
| title_sort | opportunistic sampling of yellow canary crithagra flaviventris has revealed a high genetic diversity of detected parvoviral sequences |
| topic | QH301-705.5 Biology (General) QR355-502 Virology |
| url | https://eprints.ums.edu.my/id/eprint/39448/1/ABSTRACT.pdf https://eprints.ums.edu.my/id/eprint/39448/2/FULL%20TEXT.pdf |
| work_keys_str_mv | AT yuhaozhang opportunisticsamplingofyellowcanarycrithagraflaviventrishasrevealedahighgeneticdiversityofdetectedparvoviralsequences AT saranikatalukder opportunisticsamplingofyellowcanarycrithagraflaviventrishasrevealedahighgeneticdiversityofdetectedparvoviralsequences AT mdsafiulalambhuiyan opportunisticsamplingofyellowcanarycrithagraflaviventrishasrevealedahighgeneticdiversityofdetectedparvoviralsequences AT leihe opportunisticsamplingofyellowcanarycrithagraflaviventrishasrevealedahighgeneticdiversityofdetectedparvoviralsequences AT subirsarker opportunisticsamplingofyellowcanarycrithagraflaviventrishasrevealedahighgeneticdiversityofdetectedparvoviralsequences |