The complete mitochondrial genome of the basidiomycetous fungus, tinctoporellus epimiltinus strain RS1
Tinctoporellus epimiltinus is widely known as a wood-decaying fungus. In the present study, we identi-fied the complete mitochondrial genome of this species using next-generation sequencing technology.Our findings revealed that the genomic structure is a circular molecule with a size of 51,878 bp.Co...
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| Format: | Article |
| Language: | English English |
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National Library of Medicine
2024
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| Online Access: | https://eprints.ums.edu.my/id/eprint/42116/1/ABSTRACT.pdf https://eprints.ums.edu.my/id/eprint/42116/2/FULL%20TEXT.pdf |
| _version_ | 1825715980613976064 |
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| author | Ranjita Subramaniam Vijay Subbiah Kumar Shafiquzzaman Siddiquee |
| author_facet | Ranjita Subramaniam Vijay Subbiah Kumar Shafiquzzaman Siddiquee |
| author_sort | Ranjita Subramaniam |
| collection | UMS |
| description | Tinctoporellus epimiltinus is widely known as a wood-decaying fungus. In the present study, we identi-fied the complete mitochondrial genome of this species using next-generation sequencing technology.Our findings revealed that the genomic structure is a circular molecule with a size of 51,878 bp.Consistent with most Basidiomycota species, it consists of 14 core protein-coding genes, one ribosomalprotein gene (rps3), 26 transfer RNA genes, and small and large ribosomal RNA (rns and rnl) genes.Seven additional open reading frames were identified. These included two sequences similar to DNApolymerases, an endonuclease-like sequence, and four hypothetical proteins. The mitochondrial gen-ome exhibited a nucleotide composition of A (36.24%), C (12.04%), G (13.18%), and T (38.55%), result-ing in a 25.21% GC content. A phylogenetic tree constructed using the combined mitochondrial genedataset provided insight into the phylogenetic relationships of this species within the context ofBasidiomycota and its members. |
| first_indexed | 2024-12-09T00:54:25Z |
| format | Article |
| id | ums.eprints-42116 |
| institution | Universiti Malaysia Sabah |
| language | English English |
| last_indexed | 2024-12-09T00:54:25Z |
| publishDate | 2024 |
| publisher | National Library of Medicine |
| record_format | dspace |
| spelling | ums.eprints-421162024-12-04T07:38:22Z https://eprints.ums.edu.my/id/eprint/42116/ The complete mitochondrial genome of the basidiomycetous fungus, tinctoporellus epimiltinus strain RS1 Ranjita Subramaniam Vijay Subbiah Kumar Shafiquzzaman Siddiquee QH359-425 Evolution QK504-(638) Cryptogams Tinctoporellus epimiltinus is widely known as a wood-decaying fungus. In the present study, we identi-fied the complete mitochondrial genome of this species using next-generation sequencing technology.Our findings revealed that the genomic structure is a circular molecule with a size of 51,878 bp.Consistent with most Basidiomycota species, it consists of 14 core protein-coding genes, one ribosomalprotein gene (rps3), 26 transfer RNA genes, and small and large ribosomal RNA (rns and rnl) genes.Seven additional open reading frames were identified. These included two sequences similar to DNApolymerases, an endonuclease-like sequence, and four hypothetical proteins. The mitochondrial gen-ome exhibited a nucleotide composition of A (36.24%), C (12.04%), G (13.18%), and T (38.55%), result-ing in a 25.21% GC content. A phylogenetic tree constructed using the combined mitochondrial genedataset provided insight into the phylogenetic relationships of this species within the context ofBasidiomycota and its members. National Library of Medicine 2024 Article NonPeerReviewed text en https://eprints.ums.edu.my/id/eprint/42116/1/ABSTRACT.pdf text en https://eprints.ums.edu.my/id/eprint/42116/2/FULL%20TEXT.pdf Ranjita Subramaniam and Vijay Subbiah Kumar and Shafiquzzaman Siddiquee (2024) The complete mitochondrial genome of the basidiomycetous fungus, tinctoporellus epimiltinus strain RS1. Mitochondrial dna part b: resources, 9 (8). pp. 1-6. https://doi.org/10.1080/23802359.2024.2389914 |
| spellingShingle | QH359-425 Evolution QK504-(638) Cryptogams Ranjita Subramaniam Vijay Subbiah Kumar Shafiquzzaman Siddiquee The complete mitochondrial genome of the basidiomycetous fungus, tinctoporellus epimiltinus strain RS1 |
| title | The complete mitochondrial genome of the basidiomycetous fungus, tinctoporellus epimiltinus strain RS1 |
| title_full | The complete mitochondrial genome of the basidiomycetous fungus, tinctoporellus epimiltinus strain RS1 |
| title_fullStr | The complete mitochondrial genome of the basidiomycetous fungus, tinctoporellus epimiltinus strain RS1 |
| title_full_unstemmed | The complete mitochondrial genome of the basidiomycetous fungus, tinctoporellus epimiltinus strain RS1 |
| title_short | The complete mitochondrial genome of the basidiomycetous fungus, tinctoporellus epimiltinus strain RS1 |
| title_sort | complete mitochondrial genome of the basidiomycetous fungus tinctoporellus epimiltinus strain rs1 |
| topic | QH359-425 Evolution QK504-(638) Cryptogams |
| url | https://eprints.ums.edu.my/id/eprint/42116/1/ABSTRACT.pdf https://eprints.ums.edu.my/id/eprint/42116/2/FULL%20TEXT.pdf |
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