Isolation and development of DNA microsatellite markers for the river catfish (Mystus nemurus)
The microsatellite markers for Mystus nemurus were isolated using the 5’ anchored PCR procedure. A degenerate primer was designed for the construction of the genomic library. Fourteen clones were sequenced and revealed a total of 45 microsatellite repeats. From these, 20 specific primer pairs wer...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Asian Fisheries Society
2007
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| Online Access: | http://psasir.upm.edu.my/id/eprint/32536/1/56.%20Isolation%20and%20Development%20of%20DNA%20Microsatellite%20Markers%20for%20the%20River%20Catfish%20%28Mystus%20nemurus%29.pdf |
| _version_ | 1825948098218688512 |
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| author | Hoh, Boon Peng Siraj, Siti Shapor Tan, Soon Guan Yusoff, Khatijah |
| author_facet | Hoh, Boon Peng Siraj, Siti Shapor Tan, Soon Guan Yusoff, Khatijah |
| author_sort | Hoh, Boon Peng |
| collection | UPM |
| description | The microsatellite markers for Mystus nemurus were isolated using the 5’ anchored
PCR procedure. A degenerate primer was designed for the construction of the
genomic library. Fourteen clones were sequenced and revealed a total of 45 microsatellite
repeats. From these, 20 specific primer pairs were designed and employed to characterize
unrelated fishes from six populations of M. nemurus. Thirteen loci were found to be
polymorphic. The allelic frequencies ranged from 0.007 to 0.800, while the levels of
heterozygosity ranged from 0.0563 (MnBp5-1-115b) to 0.8714 (MnBp5-1-12a). |
| first_indexed | 2024-03-06T08:23:29Z |
| format | Article |
| id | upm.eprints-32536 |
| institution | Universiti Putra Malaysia |
| language | English |
| last_indexed | 2024-03-06T08:23:29Z |
| publishDate | 2007 |
| publisher | Asian Fisheries Society |
| record_format | dspace |
| spelling | upm.eprints-325362015-10-01T00:23:23Z http://psasir.upm.edu.my/id/eprint/32536/ Isolation and development of DNA microsatellite markers for the river catfish (Mystus nemurus) Hoh, Boon Peng Siraj, Siti Shapor Tan, Soon Guan Yusoff, Khatijah The microsatellite markers for Mystus nemurus were isolated using the 5’ anchored PCR procedure. A degenerate primer was designed for the construction of the genomic library. Fourteen clones were sequenced and revealed a total of 45 microsatellite repeats. From these, 20 specific primer pairs were designed and employed to characterize unrelated fishes from six populations of M. nemurus. Thirteen loci were found to be polymorphic. The allelic frequencies ranged from 0.007 to 0.800, while the levels of heterozygosity ranged from 0.0563 (MnBp5-1-115b) to 0.8714 (MnBp5-1-12a). Asian Fisheries Society 2007 Article PeerReviewed application/pdf en http://psasir.upm.edu.my/id/eprint/32536/1/56.%20Isolation%20and%20Development%20of%20DNA%20Microsatellite%20Markers%20for%20the%20River%20Catfish%20%28Mystus%20nemurus%29.pdf Hoh, Boon Peng and Siraj, Siti Shapor and Tan, Soon Guan and Yusoff, Khatijah (2007) Isolation and development of DNA microsatellite markers for the river catfish (Mystus nemurus). Asian Fisheries Science, 20 (1). pp. 41-53. ISSN 0116-6514 http://www.asianfisheriessociety.org/publication/downloadfile.php?id=304&file=WTBkU2JVeDZRVEZPZWxVMFQxUlJkMDFFUlhwT1ZGVTBUVVJSTkU5RVozVmpSMUp0VFdwQmVFNVVSWGROUkVVOQ==&dldname=Isolation%20and%20Development%20of%20DNA%20Microsatellite%20Markers%20for%20the% |
| spellingShingle | Hoh, Boon Peng Siraj, Siti Shapor Tan, Soon Guan Yusoff, Khatijah Isolation and development of DNA microsatellite markers for the river catfish (Mystus nemurus) |
| title | Isolation and development of DNA microsatellite markers for the river catfish (Mystus nemurus) |
| title_full | Isolation and development of DNA microsatellite markers for the river catfish (Mystus nemurus) |
| title_fullStr | Isolation and development of DNA microsatellite markers for the river catfish (Mystus nemurus) |
| title_full_unstemmed | Isolation and development of DNA microsatellite markers for the river catfish (Mystus nemurus) |
| title_short | Isolation and development of DNA microsatellite markers for the river catfish (Mystus nemurus) |
| title_sort | isolation and development of dna microsatellite markers for the river catfish mystus nemurus |
| url | http://psasir.upm.edu.my/id/eprint/32536/1/56.%20Isolation%20and%20Development%20of%20DNA%20Microsatellite%20Markers%20for%20the%20River%20Catfish%20%28Mystus%20nemurus%29.pdf |
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