Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies
Gut microbiome studies have gained significant attention in recent years due to their potential in unveiling the role of microbial communities in animals’ health and ecological processes. However, the lack of standardized protocols in sample handling and processing across studies introduces variabil...
| Main Authors: | , , , , , , , , , |
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| Format: | Conference or Workshop Item |
| Language: | English |
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2023
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| Online Access: | http://eprints.uthm.edu.my/11698/1/P16739_0573a4d92207bd47e552bdd13c4757f8%205.pdf |
| _version_ | 1817857238420684800 |
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| author | Haris, Hidayah Nur Hartini Sariyati, Nur Hartini Sariyati Ramli, Farah Farhana Abdullah-Fauzi, Nurfatiha Akmal Fawwazah Suliadi Firdaus Sufahani, Suliadi Firdaus Sufahani Md-Zain, Badrul Munir Mohd-Ridwan, Abd Rahman Aifat, Nor Rahman Ibnu Maryanto, Ibnu Maryanto Abdul-Latiff, Muhammad Abu Bakar |
| author_facet | Haris, Hidayah Nur Hartini Sariyati, Nur Hartini Sariyati Ramli, Farah Farhana Abdullah-Fauzi, Nurfatiha Akmal Fawwazah Suliadi Firdaus Sufahani, Suliadi Firdaus Sufahani Md-Zain, Badrul Munir Mohd-Ridwan, Abd Rahman Aifat, Nor Rahman Ibnu Maryanto, Ibnu Maryanto Abdul-Latiff, Muhammad Abu Bakar |
| author_sort | Haris, Hidayah |
| collection | UTHM |
| description | Gut microbiome studies have gained significant attention in recent years due to their potential in unveiling the role of microbial communities in animals’ health and ecological processes. However, the lack of standardized protocols in sample handling and processing across studies introduces variability, impeding the comparability of findings. This study addresses this issue by examining methodological variations in gut microbiome research on wildlife and domesticated animals in Southeast Asia. A comprehensive search of 91 relevant studies on the SCOPUS database yielded 54 suitable publications for review, encompassing diverse taxa such as invertebrates (20), fishes (7), reptiles (3), birds (5), and mammals (19). Notably, various methodological approaches were employed to characterize microbial communities, including the source of isolation, various culture-based approaches, sequencing methods, and the targeted markers. Based on the information provided in this study, future studies should strive to develop guidelines and best practices specific to gut microbiome studies. This would enhance comparability and facilitate the integration of findings. Such efforts will also advance our understanding of the microbial diversity associated with wildlife, and its potential implications for their health and conservation |
| first_indexed | 2024-12-08T07:42:39Z |
| format | Conference or Workshop Item |
| id | uthm.eprints-11698 |
| institution | Universiti Tun Hussein Onn Malaysia |
| language | English |
| last_indexed | 2024-12-08T07:42:39Z |
| publishDate | 2023 |
| record_format | dspace |
| spelling | uthm.eprints-116982024-11-17T07:23:07Z http://eprints.uthm.edu.my/11698/ Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies Haris, Hidayah Nur Hartini Sariyati, Nur Hartini Sariyati Ramli, Farah Farhana Abdullah-Fauzi, Nurfatiha Akmal Fawwazah Suliadi Firdaus Sufahani, Suliadi Firdaus Sufahani Md-Zain, Badrul Munir Mohd-Ridwan, Abd Rahman Aifat, Nor Rahman Ibnu Maryanto, Ibnu Maryanto Abdul-Latiff, Muhammad Abu Bakar QH540-549.5 Ecology Gut microbiome studies have gained significant attention in recent years due to their potential in unveiling the role of microbial communities in animals’ health and ecological processes. However, the lack of standardized protocols in sample handling and processing across studies introduces variability, impeding the comparability of findings. This study addresses this issue by examining methodological variations in gut microbiome research on wildlife and domesticated animals in Southeast Asia. A comprehensive search of 91 relevant studies on the SCOPUS database yielded 54 suitable publications for review, encompassing diverse taxa such as invertebrates (20), fishes (7), reptiles (3), birds (5), and mammals (19). Notably, various methodological approaches were employed to characterize microbial communities, including the source of isolation, various culture-based approaches, sequencing methods, and the targeted markers. Based on the information provided in this study, future studies should strive to develop guidelines and best practices specific to gut microbiome studies. This would enhance comparability and facilitate the integration of findings. Such efforts will also advance our understanding of the microbial diversity associated with wildlife, and its potential implications for their health and conservation 2023-10-27 Conference or Workshop Item PeerReviewed text en http://eprints.uthm.edu.my/11698/1/P16739_0573a4d92207bd47e552bdd13c4757f8%205.pdf Haris, Hidayah and Nur Hartini Sariyati, Nur Hartini Sariyati and Ramli, Farah Farhana and Abdullah-Fauzi, Nurfatiha Akmal Fawwazah and Suliadi Firdaus Sufahani, Suliadi Firdaus Sufahani and Md-Zain, Badrul Munir and Mohd-Ridwan, Abd Rahman and Aifat, Nor Rahman and Ibnu Maryanto, Ibnu Maryanto and Abdul-Latiff, Muhammad Abu Bakar (2023) Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies. In: BIO Web of Conferences. https://doi.org/10.1051/bioconf/20249401005 |
| spellingShingle | QH540-549.5 Ecology Haris, Hidayah Nur Hartini Sariyati, Nur Hartini Sariyati Ramli, Farah Farhana Abdullah-Fauzi, Nurfatiha Akmal Fawwazah Suliadi Firdaus Sufahani, Suliadi Firdaus Sufahani Md-Zain, Badrul Munir Mohd-Ridwan, Abd Rahman Aifat, Nor Rahman Ibnu Maryanto, Ibnu Maryanto Abdul-Latiff, Muhammad Abu Bakar Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies |
| title | Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies |
| title_full | Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies |
| title_fullStr | Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies |
| title_full_unstemmed | Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies |
| title_short | Assessing methodological variability in gut microbiome studies: lessons from southeast asian for effective conservation strategies |
| title_sort | assessing methodological variability in gut microbiome studies lessons from southeast asian for effective conservation strategies |
| topic | QH540-549.5 Ecology |
| url | http://eprints.uthm.edu.my/11698/1/P16739_0573a4d92207bd47e552bdd13c4757f8%205.pdf |
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