Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis
In the present study, the nearly complete mitochondrial genome of Euphaea ochracea was described and its phylogenetic position in the family Euphaeidae was analyzed. Here, we recovered 13 proteincoding genes, 22 transfer RNAs, 2 ribosomal RNAs and a partial control region, resulting in a mitogenome...
| Main Authors: | , , , , , , , |
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| Format: | Article |
| Language: | English |
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Tayler & Francis
2023
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| Online Access: | http://eprints.uthm.edu.my/8799/1/J15813_2a1312a3edeb59d651d494bdfa277782.pdf |
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| author | Miga, Marylin Jahari, Puteri Nur Syahzanani Parimannan, Sivachandran Rajandas, Heera Latiff, Muhammad Abu Bakar Yap Jing Wei, Yap Jing Wei Shamsir, Mohd Shahir Mohd Salleh, Faezah |
| author_facet | Miga, Marylin Jahari, Puteri Nur Syahzanani Parimannan, Sivachandran Rajandas, Heera Latiff, Muhammad Abu Bakar Yap Jing Wei, Yap Jing Wei Shamsir, Mohd Shahir Mohd Salleh, Faezah |
| author_sort | Miga, Marylin |
| collection | UTHM |
| description | In the present study, the nearly complete mitochondrial genome of Euphaea ochracea was described and its phylogenetic position in the family Euphaeidae was analyzed. Here, we recovered 13 proteincoding genes, 22 transfer RNAs, 2 ribosomal RNAs and a partial control region, resulting in a mitogenome length of 15,545bp. All protein-coding genes were initiated by the typical ATN codon except nad3 and nad1, which utilizes the TTG codon. Four protein-coding genes (cox1, cox2, cox3 and nad5) are terminated by an incomplete stop codon T, while others end with either a TAA or TAG codon. The intergenic spacer region, S5, is absent in this mitogenome, supporting the lack of this region as a specific character in damselflies. Phylogenetic analysis showed that the newly sequenced E. ochracea is phylogenetically closer to E. ornata with a high support value. |
| first_indexed | 2024-03-05T22:00:43Z |
| format | Article |
| id | uthm.eprints-8799 |
| institution | Universiti Tun Hussein Onn Malaysia |
| language | English |
| last_indexed | 2024-03-05T22:00:43Z |
| publishDate | 2023 |
| publisher | Tayler & Francis |
| record_format | dspace |
| spelling | uthm.eprints-87992023-06-12T07:40:31Z http://eprints.uthm.edu.my/8799/ Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis Miga, Marylin Jahari, Puteri Nur Syahzanani Parimannan, Sivachandran Rajandas, Heera Latiff, Muhammad Abu Bakar Yap Jing Wei, Yap Jing Wei Shamsir, Mohd Shahir Mohd Salleh, Faezah QR Microbiology In the present study, the nearly complete mitochondrial genome of Euphaea ochracea was described and its phylogenetic position in the family Euphaeidae was analyzed. Here, we recovered 13 proteincoding genes, 22 transfer RNAs, 2 ribosomal RNAs and a partial control region, resulting in a mitogenome length of 15,545bp. All protein-coding genes were initiated by the typical ATN codon except nad3 and nad1, which utilizes the TTG codon. Four protein-coding genes (cox1, cox2, cox3 and nad5) are terminated by an incomplete stop codon T, while others end with either a TAA or TAG codon. The intergenic spacer region, S5, is absent in this mitogenome, supporting the lack of this region as a specific character in damselflies. Phylogenetic analysis showed that the newly sequenced E. ochracea is phylogenetically closer to E. ornata with a high support value. Tayler & Francis 2023 Article PeerReviewed text en http://eprints.uthm.edu.my/8799/1/J15813_2a1312a3edeb59d651d494bdfa277782.pdf Miga, Marylin and Jahari, Puteri Nur Syahzanani and Parimannan, Sivachandran and Rajandas, Heera and Latiff, Muhammad Abu Bakar and Yap Jing Wei, Yap Jing Wei and Shamsir, Mohd Shahir and Mohd Salleh, Faezah (2023) Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis. MITOGENOME ANNOUNCEMENT, 8 (2). pp. 292-296. https://doi.org/10.1080/23802359.2023.2179355 |
| spellingShingle | QR Microbiology Miga, Marylin Jahari, Puteri Nur Syahzanani Parimannan, Sivachandran Rajandas, Heera Latiff, Muhammad Abu Bakar Yap Jing Wei, Yap Jing Wei Shamsir, Mohd Shahir Mohd Salleh, Faezah Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis |
| title | Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis |
| title_full | Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis |
| title_fullStr | Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis |
| title_full_unstemmed | Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis |
| title_short | Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis |
| title_sort | characterization of the nearly complete mitochondrial genome of ochraceous darkies euphaea ochracea selys 1859 odonata zygoptera euphaeidae and phylogenetic analysis |
| topic | QR Microbiology |
| url | http://eprints.uthm.edu.my/8799/1/J15813_2a1312a3edeb59d651d494bdfa277782.pdf |
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