Development matK gene as DNA barcode to assess evolutionary relationship of important tropical forest tree genus Mangifera (anacardiaceae) in Indonesia and Thailand
MaturaseK (matK) gene of chloroplast DNA has been served as appropriate candidate to be a DNA barcode in angiosperms. Using this DNA marker, 19 species of genus Mangifera, one of ecologically important crop, collected from Indonesia and Thailand were analyzed. Phylogenetic analysis using parsimony m...
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| Format: | Article |
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Penerbit UTM Press
2012
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| author | Hidayat, Topik Pancoro, Adi Kusumawaty, Diah Eiadthong, Wichan |
| author_facet | Hidayat, Topik Pancoro, Adi Kusumawaty, Diah Eiadthong, Wichan |
| author_sort | Hidayat, Topik |
| collection | ePrints |
| description | MaturaseK (matK) gene of chloroplast DNA has been served as appropriate candidate to be a DNA barcode in angiosperms. Using this DNA marker, 19 species of genus Mangifera, one of ecologically important crop, collected from Indonesia and Thailand were analyzed. Phylogenetic analysis using parsimony method revealed that the gene could clasify Mangifera into three major groups, namely group I, II, and III. Moreover, the matK barcode can identify Mangifera species that is originated from Thailand. Although this classification system is different with the previous system, it can provide a new information about Mangifera taxonomy. Results further exhibited that DNA sequences of the matK of two Mangifera species (M. laurina dan M. macrocarpa) are different between Indonesia and Thailand specimens. |
| first_indexed | 2024-03-05T19:21:06Z |
| format | Article |
| id | utm.eprints-46805 |
| institution | Universiti Teknologi Malaysia - ePrints |
| last_indexed | 2024-03-05T19:21:06Z |
| publishDate | 2012 |
| publisher | Penerbit UTM Press |
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| spelling | utm.eprints-468052017-11-01T04:17:13Z http://eprints.utm.my/46805/ Development matK gene as DNA barcode to assess evolutionary relationship of important tropical forest tree genus Mangifera (anacardiaceae) in Indonesia and Thailand Hidayat, Topik Pancoro, Adi Kusumawaty, Diah Eiadthong, Wichan TK Electrical engineering. Electronics Nuclear engineering MaturaseK (matK) gene of chloroplast DNA has been served as appropriate candidate to be a DNA barcode in angiosperms. Using this DNA marker, 19 species of genus Mangifera, one of ecologically important crop, collected from Indonesia and Thailand were analyzed. Phylogenetic analysis using parsimony method revealed that the gene could clasify Mangifera into three major groups, namely group I, II, and III. Moreover, the matK barcode can identify Mangifera species that is originated from Thailand. Although this classification system is different with the previous system, it can provide a new information about Mangifera taxonomy. Results further exhibited that DNA sequences of the matK of two Mangifera species (M. laurina dan M. macrocarpa) are different between Indonesia and Thailand specimens. Penerbit UTM Press 2012 Article PeerReviewed Hidayat, Topik and Pancoro, Adi and Kusumawaty, Diah and Eiadthong, Wichan (2012) Development matK gene as DNA barcode to assess evolutionary relationship of important tropical forest tree genus Mangifera (anacardiaceae) in Indonesia and Thailand. Jurnal Teknologi (Sciences and Engineering), 59 (SUP. 1). pp. 17-20. ISSN 0127-9696 http://dx.doi.org/10.11113/jt.v59.1572 |
| spellingShingle | TK Electrical engineering. Electronics Nuclear engineering Hidayat, Topik Pancoro, Adi Kusumawaty, Diah Eiadthong, Wichan Development matK gene as DNA barcode to assess evolutionary relationship of important tropical forest tree genus Mangifera (anacardiaceae) in Indonesia and Thailand |
| title | Development matK gene as DNA barcode to assess evolutionary relationship of important tropical forest tree genus Mangifera (anacardiaceae) in Indonesia and Thailand |
| title_full | Development matK gene as DNA barcode to assess evolutionary relationship of important tropical forest tree genus Mangifera (anacardiaceae) in Indonesia and Thailand |
| title_fullStr | Development matK gene as DNA barcode to assess evolutionary relationship of important tropical forest tree genus Mangifera (anacardiaceae) in Indonesia and Thailand |
| title_full_unstemmed | Development matK gene as DNA barcode to assess evolutionary relationship of important tropical forest tree genus Mangifera (anacardiaceae) in Indonesia and Thailand |
| title_short | Development matK gene as DNA barcode to assess evolutionary relationship of important tropical forest tree genus Mangifera (anacardiaceae) in Indonesia and Thailand |
| title_sort | development matk gene as dna barcode to assess evolutionary relationship of important tropical forest tree genus mangifera anacardiaceae in indonesia and thailand |
| topic | TK Electrical engineering. Electronics Nuclear engineering |
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