Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect
Roseivirga sp. strain D-25 is an aerobic marine bacterium isolated from seawater collected from Desaru beach, Malaysia. To date, the genus Roseivirga consists of only four species with no genome sequence reported. Here, we present the genome sequence of Roseivirga sp. strain D-25 (= KCTC 42709 = DSM...
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Elsevier B.V.
2016
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| author | Selvaratnam, C. Thevarajoo, S. Ee, R. Chan, K. G. Bennett, J. P. Goh, K. M. Chong, C. S. |
| author_facet | Selvaratnam, C. Thevarajoo, S. Ee, R. Chan, K. G. Bennett, J. P. Goh, K. M. Chong, C. S. |
| author_sort | Selvaratnam, C. |
| collection | ePrints |
| description | Roseivirga sp. strain D-25 is an aerobic marine bacterium isolated from seawater collected from Desaru beach, Malaysia. To date, the genus Roseivirga consists of only four species with no genome sequence reported. Here, we present the genome sequence of Roseivirga sp. strain D-25 (= KCTC 42709 = DSM 101709), with a genome size of approximately 4.08 Mbp and G + C content of 39.18%. Genome sequence analysis of strain D-25 revealed the presence of genes related to petroleum hydrocarbon degradation, 2,4,6-trinitrotoluene detoxification, heavy metals bioremediation and production of carotenoids, which shed light on the potential application of this strain. |
| first_indexed | 2024-03-05T20:03:30Z |
| format | Article |
| id | utm.eprints-72281 |
| institution | Universiti Teknologi Malaysia - ePrints |
| last_indexed | 2024-03-05T20:03:30Z |
| publishDate | 2016 |
| publisher | Elsevier B.V. |
| record_format | dspace |
| spelling | utm.eprints-722812017-11-20T08:18:52Z http://eprints.utm.my/72281/ Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect Selvaratnam, C. Thevarajoo, S. Ee, R. Chan, K. G. Bennett, J. P. Goh, K. M. Chong, C. S. QH301 Biology Roseivirga sp. strain D-25 is an aerobic marine bacterium isolated from seawater collected from Desaru beach, Malaysia. To date, the genus Roseivirga consists of only four species with no genome sequence reported. Here, we present the genome sequence of Roseivirga sp. strain D-25 (= KCTC 42709 = DSM 101709), with a genome size of approximately 4.08 Mbp and G + C content of 39.18%. Genome sequence analysis of strain D-25 revealed the presence of genes related to petroleum hydrocarbon degradation, 2,4,6-trinitrotoluene detoxification, heavy metals bioremediation and production of carotenoids, which shed light on the potential application of this strain. Elsevier B.V. 2016 Article PeerReviewed Selvaratnam, C. and Thevarajoo, S. and Ee, R. and Chan, K. G. and Bennett, J. P. and Goh, K. M. and Chong, C. S. (2016) Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect. Marine Genomics, 28 . pp. 29-31. ISSN 1874-7787 https://www.scopus.com/inward/record.uri?eid=2-s2.0-84963988110&doi=10.1016%2fj.margen.2016.04.004&partnerID=40&md5=fb4ff335d807853005a0b17f289db22f |
| spellingShingle | QH301 Biology Selvaratnam, C. Thevarajoo, S. Ee, R. Chan, K. G. Bennett, J. P. Goh, K. M. Chong, C. S. Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect |
| title | Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect |
| title_full | Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect |
| title_fullStr | Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect |
| title_full_unstemmed | Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect |
| title_short | Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect |
| title_sort | genome sequence of roseivirga sp strain d 25 and its potential applications from the genomic aspect |
| topic | QH301 Biology |
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