DNA splicing systems with at most two cutting sites of a non-palindromic restriction enzyme
The modelling of splicing systems is simulated by the process of cleaving and recombining DNA molecules with the presence of a ligase and restriction enzymes which are biologically called as endodeoxyribonucleases. The molecules resulting from DNA splicing systems are known as splicing languages. Pa...
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| Language: | English |
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Penerbit UTM Press
2019
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| Online Access: | http://eprints.utm.my/84877/1/NorHanizaSarmin2019_DNASplicingSystemswithatMostTwo.pdf |
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| author | Ismail, Nurul Izzaty Wan, Heng Fong Sarmin, Nor Haniza |
| author_facet | Ismail, Nurul Izzaty Wan, Heng Fong Sarmin, Nor Haniza |
| author_sort | Ismail, Nurul Izzaty |
| collection | ePrints |
| description | The modelling of splicing systems is simulated by the process of cleaving and recombining DNA molecules with the presence of a ligase and restriction enzymes which are biologically called as endodeoxyribonucleases. The molecules resulting from DNA splicing systems are known as splicing languages. Palindrome is a sequence of strings that reads the same forward and backward. In this research, the splicing languages resulting from DNA splicing systems with one non-palindromic restriction enzyme are determined using the notation from Head splicing system. The generalisations of splicing languages for DNA splicing systems involving a cutting site and two non-overlapping cutting sites of one non-palindromic restriction enzyme are presented in the first and second theorems, respectively, which are proved using direct and induction methods. The result from the first theorem shows a trivial string which is the initial DNA molecule; while the second theorem determines a splicing language consisting of a set of resulting DNA molecules from the respective DNA splicing system. |
| first_indexed | 2024-03-05T20:34:09Z |
| format | Article |
| id | utm.eprints-84877 |
| institution | Universiti Teknologi Malaysia - ePrints |
| language | English |
| last_indexed | 2024-03-05T20:34:09Z |
| publishDate | 2019 |
| publisher | Penerbit UTM Press |
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| spelling | utm.eprints-848772020-02-29T12:39:55Z http://eprints.utm.my/84877/ DNA splicing systems with at most two cutting sites of a non-palindromic restriction enzyme Ismail, Nurul Izzaty Wan, Heng Fong Sarmin, Nor Haniza QA Mathematics The modelling of splicing systems is simulated by the process of cleaving and recombining DNA molecules with the presence of a ligase and restriction enzymes which are biologically called as endodeoxyribonucleases. The molecules resulting from DNA splicing systems are known as splicing languages. Palindrome is a sequence of strings that reads the same forward and backward. In this research, the splicing languages resulting from DNA splicing systems with one non-palindromic restriction enzyme are determined using the notation from Head splicing system. The generalisations of splicing languages for DNA splicing systems involving a cutting site and two non-overlapping cutting sites of one non-palindromic restriction enzyme are presented in the first and second theorems, respectively, which are proved using direct and induction methods. The result from the first theorem shows a trivial string which is the initial DNA molecule; while the second theorem determines a splicing language consisting of a set of resulting DNA molecules from the respective DNA splicing system. Penerbit UTM Press 2019 Article PeerReviewed application/pdf en http://eprints.utm.my/84877/1/NorHanizaSarmin2019_DNASplicingSystemswithatMostTwo.pdf Ismail, Nurul Izzaty and Wan, Heng Fong and Sarmin, Nor Haniza (2019) DNA splicing systems with at most two cutting sites of a non-palindromic restriction enzyme. MATEMATIK, 35 (Aug). pp. 129-137. ISSN 0127-9602 https://dx.doi.org/10.11113/matematika.v35.n2.1108 DOI:10.11113/matematika.v35.n2.1108 |
| spellingShingle | QA Mathematics Ismail, Nurul Izzaty Wan, Heng Fong Sarmin, Nor Haniza DNA splicing systems with at most two cutting sites of a non-palindromic restriction enzyme |
| title | DNA splicing systems with at most two cutting sites of a non-palindromic restriction enzyme |
| title_full | DNA splicing systems with at most two cutting sites of a non-palindromic restriction enzyme |
| title_fullStr | DNA splicing systems with at most two cutting sites of a non-palindromic restriction enzyme |
| title_full_unstemmed | DNA splicing systems with at most two cutting sites of a non-palindromic restriction enzyme |
| title_short | DNA splicing systems with at most two cutting sites of a non-palindromic restriction enzyme |
| title_sort | dna splicing systems with at most two cutting sites of a non palindromic restriction enzyme |
| topic | QA Mathematics |
| url | http://eprints.utm.my/84877/1/NorHanizaSarmin2019_DNASplicingSystemswithatMostTwo.pdf |
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