The first complete mitochondrial genome data of geoffroy's rousette, rousettus amplexicaudatus originating from Malaysia
The increasing interest in understanding the evolutionary relationship between members of the Pteropodidae family has been greatly aided by genomic data from the Old World fruit bats. Here we present the complete mitogenome of Geoffroy’s rousette, Rousettus amplexicaudatus found in Peninsular Malays...
| Main Authors: | , , , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor and Francis Ltd.
2020
|
| Subjects: | |
| Online Access: | http://eprints.utm.my/93283/1/PuteriNurSyahzanani2020_TheFirstCompleteMitochondrialGenome.pdf |
| _version_ | 1796865591260217344 |
|---|---|
| author | Jahari, Puteri Nur Syahzanani Mohd. Azman, Shahfiz Munian, Kaviarasu M. Fauzi, Noor Faradiana Shamsir, Mohd. Shahir Richter, Stine R. Mohd. Salleh, Faezah |
| author_facet | Jahari, Puteri Nur Syahzanani Mohd. Azman, Shahfiz Munian, Kaviarasu M. Fauzi, Noor Faradiana Shamsir, Mohd. Shahir Richter, Stine R. Mohd. Salleh, Faezah |
| author_sort | Jahari, Puteri Nur Syahzanani |
| collection | ePrints |
| description | The increasing interest in understanding the evolutionary relationship between members of the Pteropodidae family has been greatly aided by genomic data from the Old World fruit bats. Here we present the complete mitogenome of Geoffroy’s rousette, Rousettus amplexicaudatus found in Peninsular Malaysia. The mitogenome constructed is 16,511bp in length containing 37 genes; 13 protein-coding genes (PCGs), 22 tRNA genes, two rRNA genes, and a D-loop region. The overall base composition is estimated to be 32.28% for A, 25.64% for T, 14.09% for G and 27.98% for C, indicating a slightly AT rich feature (57.93%). A phylogenetic and BLASTn analysis against other available mitogenomes showed Malaysian R. amplexicaudatus matched 98% similarity to the same species in Cambodia and Vietnam. However, it differed considerably (92.53% similarity) with the same species in the Philippines. This suggests flexibility in Rousettus sp. with regards to adapting to mesic and dry habitats, ability for long-distance dispersal and remarkably precise lingual echolocation thus supporting its wide-range distribution and colonization. Further taxonomical and mitogenomic comparatives are required in resolving the evolutionary relationship between Rousettus spp. |
| first_indexed | 2024-03-05T20:59:20Z |
| format | Article |
| id | utm.eprints-93283 |
| institution | Universiti Teknologi Malaysia - ePrints |
| language | English |
| last_indexed | 2024-03-05T20:59:20Z |
| publishDate | 2020 |
| publisher | Taylor and Francis Ltd. |
| record_format | dspace |
| spelling | utm.eprints-932832021-11-19T03:30:01Z http://eprints.utm.my/93283/ The first complete mitochondrial genome data of geoffroy's rousette, rousettus amplexicaudatus originating from Malaysia Jahari, Puteri Nur Syahzanani Mohd. Azman, Shahfiz Munian, Kaviarasu M. Fauzi, Noor Faradiana Shamsir, Mohd. Shahir Richter, Stine R. Mohd. Salleh, Faezah Q Science (General) The increasing interest in understanding the evolutionary relationship between members of the Pteropodidae family has been greatly aided by genomic data from the Old World fruit bats. Here we present the complete mitogenome of Geoffroy’s rousette, Rousettus amplexicaudatus found in Peninsular Malaysia. The mitogenome constructed is 16,511bp in length containing 37 genes; 13 protein-coding genes (PCGs), 22 tRNA genes, two rRNA genes, and a D-loop region. The overall base composition is estimated to be 32.28% for A, 25.64% for T, 14.09% for G and 27.98% for C, indicating a slightly AT rich feature (57.93%). A phylogenetic and BLASTn analysis against other available mitogenomes showed Malaysian R. amplexicaudatus matched 98% similarity to the same species in Cambodia and Vietnam. However, it differed considerably (92.53% similarity) with the same species in the Philippines. This suggests flexibility in Rousettus sp. with regards to adapting to mesic and dry habitats, ability for long-distance dispersal and remarkably precise lingual echolocation thus supporting its wide-range distribution and colonization. Further taxonomical and mitogenomic comparatives are required in resolving the evolutionary relationship between Rousettus spp. Taylor and Francis Ltd. 2020-07-02 Article PeerReviewed application/pdf en http://eprints.utm.my/93283/1/PuteriNurSyahzanani2020_TheFirstCompleteMitochondrialGenome.pdf Jahari, Puteri Nur Syahzanani and Mohd. Azman, Shahfiz and Munian, Kaviarasu and M. Fauzi, Noor Faradiana and Shamsir, Mohd. Shahir and Richter, Stine R. and Mohd. Salleh, Faezah (2020) The first complete mitochondrial genome data of geoffroy's rousette, rousettus amplexicaudatus originating from Malaysia. Mitochondrial DNA Part B: Resources, 5 (3). pp. 3280-3282. ISSN 2380-2359 http://dx.doi.org/10.1080/23802359.2020.1812449 DOI:10.1080/23802359.2020.1812449 |
| spellingShingle | Q Science (General) Jahari, Puteri Nur Syahzanani Mohd. Azman, Shahfiz Munian, Kaviarasu M. Fauzi, Noor Faradiana Shamsir, Mohd. Shahir Richter, Stine R. Mohd. Salleh, Faezah The first complete mitochondrial genome data of geoffroy's rousette, rousettus amplexicaudatus originating from Malaysia |
| title | The first complete mitochondrial genome data of geoffroy's rousette, rousettus amplexicaudatus originating from Malaysia |
| title_full | The first complete mitochondrial genome data of geoffroy's rousette, rousettus amplexicaudatus originating from Malaysia |
| title_fullStr | The first complete mitochondrial genome data of geoffroy's rousette, rousettus amplexicaudatus originating from Malaysia |
| title_full_unstemmed | The first complete mitochondrial genome data of geoffroy's rousette, rousettus amplexicaudatus originating from Malaysia |
| title_short | The first complete mitochondrial genome data of geoffroy's rousette, rousettus amplexicaudatus originating from Malaysia |
| title_sort | first complete mitochondrial genome data of geoffroy s rousette rousettus amplexicaudatus originating from malaysia |
| topic | Q Science (General) |
| url | http://eprints.utm.my/93283/1/PuteriNurSyahzanani2020_TheFirstCompleteMitochondrialGenome.pdf |
| work_keys_str_mv | AT jahariputerinursyahzanani thefirstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia AT mohdazmanshahfiz thefirstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia AT muniankaviarasu thefirstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia AT mfauzinoorfaradiana thefirstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia AT shamsirmohdshahir thefirstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia AT richterstiner thefirstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia AT mohdsallehfaezah thefirstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia AT jahariputerinursyahzanani firstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia AT mohdazmanshahfiz firstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia AT muniankaviarasu firstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia AT mfauzinoorfaradiana firstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia AT shamsirmohdshahir firstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia AT richterstiner firstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia AT mohdsallehfaezah firstcompletemitochondrialgenomedataofgeoffroysrousetterousettusamplexicaudatusoriginatingfrommalaysia |