A DNA sequence design for direct-proportional length-based DNA computing using DNASequenceGenerator

DNA computing has emerged as an interdiciplinary field that draws together moleculer biology, chemistry, computer science, and mathematics. This unconventional computation has been proven to solve weighted graph problem such as the shortest path problem and the traveling salesman problem. One of the...

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Main Authors: Ibrahim, Zuwairie, Kurniawan, Tri Basuki, Khalid, Marzuki, Sarmin, Nor Haniza
Format: Article
Language:English
Published: IEEE Computer Society 2008
Subjects:
Online Access:http://eprints.utm.my/9923/1/ZuwairieIbrahim2008_A_DNASequenceDesignForDirect-proportionalLength-based.pdf
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author Ibrahim, Zuwairie
Kurniawan, Tri Basuki
Khalid, Marzuki
Sarmin, Nor Haniza
author_facet Ibrahim, Zuwairie
Kurniawan, Tri Basuki
Khalid, Marzuki
Sarmin, Nor Haniza
author_sort Ibrahim, Zuwairie
collection ePrints
description DNA computing has emerged as an interdiciplinary field that draws together moleculer biology, chemistry, computer science, and mathematics. This unconventional computation has been proven to solve weighted graph problem such as the shortest path problem and the traveling salesman problem. One of the fundamental improvements in DNA computing is the direct-proportional length-based DNA computing. Generally, in DNA computing, the DNA sequences used for the computation should be critically designed in order to reduce error that could occur during computation. In this paper, a procedure to design the DNA sequences for the direct-proportional length- based DNA computing is presented. The procedure includes DNASequenceGenerator, a graph-based approach for designing a set of good DNA sequences.
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spelling utm.eprints-99232017-10-23T11:14:00Z http://eprints.utm.my/9923/ A DNA sequence design for direct-proportional length-based DNA computing using DNASequenceGenerator Ibrahim, Zuwairie Kurniawan, Tri Basuki Khalid, Marzuki Sarmin, Nor Haniza Q Science (General) DNA computing has emerged as an interdiciplinary field that draws together moleculer biology, chemistry, computer science, and mathematics. This unconventional computation has been proven to solve weighted graph problem such as the shortest path problem and the traveling salesman problem. One of the fundamental improvements in DNA computing is the direct-proportional length-based DNA computing. Generally, in DNA computing, the DNA sequences used for the computation should be critically designed in order to reduce error that could occur during computation. In this paper, a procedure to design the DNA sequences for the direct-proportional length- based DNA computing is presented. The procedure includes DNASequenceGenerator, a graph-based approach for designing a set of good DNA sequences. IEEE Computer Society 2008 Article PeerReviewed application/pdf en http://eprints.utm.my/9923/1/ZuwairieIbrahim2008_A_DNASequenceDesignForDirect-proportionalLength-based.pdf Ibrahim, Zuwairie and Kurniawan, Tri Basuki and Khalid, Marzuki and Sarmin, Nor Haniza (2008) A DNA sequence design for direct-proportional length-based DNA computing using DNASequenceGenerator. Second International Conference on Innovative Computing, Information and Control, ICICIC 2007, 442800 . http://dx.doi.org/10.1109/ICICIC.2007.17 doi:10.1109/ICICIC.2007.17
spellingShingle Q Science (General)
Ibrahim, Zuwairie
Kurniawan, Tri Basuki
Khalid, Marzuki
Sarmin, Nor Haniza
A DNA sequence design for direct-proportional length-based DNA computing using DNASequenceGenerator
title A DNA sequence design for direct-proportional length-based DNA computing using DNASequenceGenerator
title_full A DNA sequence design for direct-proportional length-based DNA computing using DNASequenceGenerator
title_fullStr A DNA sequence design for direct-proportional length-based DNA computing using DNASequenceGenerator
title_full_unstemmed A DNA sequence design for direct-proportional length-based DNA computing using DNASequenceGenerator
title_short A DNA sequence design for direct-proportional length-based DNA computing using DNASequenceGenerator
title_sort dna sequence design for direct proportional length based dna computing using dnasequencegenerator
topic Q Science (General)
url http://eprints.utm.my/9923/1/ZuwairieIbrahim2008_A_DNASequenceDesignForDirect-proportionalLength-based.pdf
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