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Novel multilocus sequence typing and global sequence clustering schemes for characterizing the population diversity of Streptococcus mitis
Published 2022“…We used internal 450-bp sequence fragments of seven housekeeping genes (<em>accA</em>, <em>gki</em>, <em>hom</em>, <em>oppC</em>, <em>patB</em>, <em>rlmN</em>, and <em>tsf</em>) to define the MLST scheme and derived the global S. mitis sequence clusters using the PopPUNK clustering algorithm. We identified an initial set of 259 sequence types (STs) and 258 global sequence clusters. …”
Journal article