Genomic Survey and Cold-Induced Expression Patterns of <i>bHLH</i> Transcription Factors in <i>Liriodendron chinense</i> (Hemsl) Sarg. by Rongxue Li, Baseer Ahmad, Delight Hwarari, Dong’ao Li, Ye Lu, Min Gao, Jinhui Chen, Liming Yang

“…Our results showed that <i>LcbHLH</i> genes clustered in the same subfamily exhibited a similar conservative exon-intron pattern. …”
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Genome-wide identification of the NAC gene family and its functional analysis in Liriodendron by Siqin Liu, Yuanlin Guan, Yuhao Weng, Bojun Liao, Lu Tong, Zhaodong Hao, Jinhui Chen, Jisen Shi, Tielong Cheng

“…The expression pattern analysis of LcNACs based on transcriptome data and RT-qPCR obtained from L. chinense leaves indicated differential expression responses to drought, cold, and heat stress. Genes in the NAM subfamily expressed differently during abiotic stress, and LcNAC6/18/41/65 might be the key genes in response to abiotic stress. …”
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Genome-wide analysis of the GRAS gene family in Liriodendron chinense reveals the putative function in abiotic stress and plant development by Yuhao Weng, Yuhao Weng, Xinying Chen, Xinying Chen, Zhaodong Hao, Zhaodong Hao, Lu Lu, Lu Lu, Xinru Wu, Xinru Wu, Jiaji Zhang, Jiaji Zhang, Jingxiang Wu, Jingxiang Wu, Jisen Shi, Jisen Shi, Jinhui Chen, Jinhui Chen

“…We also investigated whether GRAS genes are responsive to stress by carrying out RNA sequencing (RNA-seq) analysis, and we found that the genes in the PAT subfamily were activated upon stress treatment, suggesting that these genes may help plants survive stressful environments. …”
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Genome-Wide Analysis and Abiotic Stress-Responsive Patterns of <i>COBRA-like</i> Gene Family in <i>Liriodendron chinense</i> by Chen Qiu, Jinhui Chen, Weihuang Wu, Bojun Liao, Xueyan Zheng, Yong Li, Jing Huang, Jisen Shi, Zhaodong Hao

“…Phylogenetic analysis showed that these <i>LcCOBL</i> genes can be divided into two subfamilies, i.e., SF I and II. In the conserved motif analysis of two subfamilies, SF I contained 10 predicted motifs, while SF II contained 4–6 motifs. …”
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The Identification and Expression Analysis of the <i>Liriodendron chinense F-Box</i> Gene Family by Shichan He, Lin Xu, Weihuang Wu, Jiaji Zhang, Zhaodong Hao, Lu Lu, Jisen Shi, Jinhui Chen

“…Based on specific domains and phylogenetic analyses, these genes were divided into 10 distinct subfamilies. We further analyzed their gene structure, conserved domain and chromosome distribution, genome-wide replication events, and collinearity. …”
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Genomic survey and expression analysis of LcARFs reveal multiple functions to somatic embryogenesis in Liriodendron by Lin Xu, Ye Liu, Jiaji Zhang, Weihuang Wu, Zhaodong Hao, Shichan He, Yiran Li, Jisen Shi, Jinhui Chen

“…Result In this study, we have identified 20 LcARF genes that belong to three subfamilies in the genome of L. chinense. The analysis of their conserved domains, gene structure, and phylogeny suggests that LcARFs may be evolutionarily conserved and functionally similar to other plant ARFs. …”
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Genome-Wide Identification and Expression Analysis of <i>TPS</i> Gene Family in <i>Liriodendron chinense</i> by Zijian Cao, Qianxi Ma, Yuhao Weng, Jisen Shi, Jinhui Chen, Zhaodong Hao

“…A phylogenetic tree analysis showed that they were clustered into five subfamilies and unevenly distributed across six chromosomes. …”
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Genome-Wide Identification and Expression Analysis of <i>CCO</i> Gene Family in <i>Liriodendron chinense</i> by Guoxia Xue, Lingfeng Hu, Liming Zhu, Ya Chen, Chen Qiu, Ruifang Fan, Xiaoxiao Ma, Zijian Cao, Jinhui Chen, Jisen Shi, Zhaodong Hao

“…A total of 10 <i>LcCCO</i> genes were identified and divided into 6 subfamilies according to the phylogenetic analysis. …”
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Characterization of the <i>Liriodendron chinense</i> Pentatricopeptide Repeat (PPR) Gene Family and Its Role in Osmotic Stress Response by Xiaoxiao Ma, Dandan Wang, Guoxia Xue, Xueyan Zheng, Ye Lu, Jisen Shi, Zhaodong Hao, Jinhui Chen

“…A phylogenetic analysis showed that the <i>LcPPR</i> genes could roughly be divided into the P and PLS subfamilies. We found that 598 <i>LcPPR</i> genes were widely distributed across 19 chromosomes. …”
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<i>OSCA</i> Genes in <i>Liriodendron chinense</i>: Characterization, Evolution and Response to Abiotic Stress by Yongchao Ke, Mingyue Xu, Delight Hwarari, Baseer Ahmad, Rongxue Li, Yuanlin Guan, Jinhui Chen, Liming Yang

“…Additionally, phylogenetic analysis of <i>LchiOSCAs</i> exhibited a classification into four subfamilies based on the tree arrangement, similarity in the gene structures, and conserved motif numbers and order. …”
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Genome-wide identification, characterization, and genetic diversity of CCR gene family in Dalbergia odorifera by Yue Wang, Yue Wang, Jieru Xu, Jieru Xu, Wenxiu Zhao, Wenxiu Zhao, Jia Li, Jia Li, Jinhui Chen, Jinhui Chen, Jinhui Chen

“…They were divided into three subfamilies and were unevenly distributed on 10 chromosomes. …”
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