Identification of critical base pairs required for CTCF binding in motif M1 and M2 by Wufeng Li, Liping Shang, Kaimeng Huang, Jiao Li, Zhibin Wang, Hongjie Yao

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Genome Filtering Using Methylation- Sensitive Restriction Enzymes with Six Base Pair Recognition Sites by John P. Fellers

“…Methyl-sensitive restriction enzymes, with six base pair recognition sites, were evaluated on genomic DNA of the bread wheat ‘Chinese Spring’ as a different approach to enrich for genes. …”
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A Pair of Manganese(III) Schiff-Base Enantiomers: Synthesis, Crystal Structure and Magnetic Characterization by Hongyan Zhang, Chongchong Xue, Daopeng Zhang

“…Based-on the quasi-planar tetra-dentate Schiff-base ligand, a pair of manganese(III) Schiff-base enantiomers formulated as {[Mn(R,R-3-MeOSalcy)(H2O)(CH3OH)]ClO4}2 (1) and {[Mn(S,S-3-MeOSalcy)(H2O)(CH3OH)]ClO4}2 (2) (3-MeOSalcy = N,N′-(1,2-cyclohexanediylethylene)bis(3-methoxysalicylideneiminato)dianion) have been synthesized and characterized by element analysis. …”
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Cooperative base pair melting by helicase and polymerase positioned one nucleotide from each other by Divya Nandakumar, Manjula Pandey, Smita S Patel

“…Our 2-aminopurine studies show that helicase and polymerase both participate in DNA melting, but each enzyme melts the junction base pair partially. When combined, the junction base pair is melted cooperatively provided the helicase is located one nucleotide ahead of the primer-end. …”
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Covering All the Bases in Genetics: Simple Shorthands and Diagrams for Teaching Base Pairing to Biology Undergraduates by Sergei Kuchin

“…Explaining base pairing is an important element in teaching undergraduate genetics. …”
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A computational approach to map nucleosome positions and alternative chromatin states with base pair resolution by Xu Zhou, Alexander W Blocker, Edoardo M Airoldi, Erin K O'Shea

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Terpene Chain Length Affects the Base Pairing Discrimination of S-geranyl-2-thiouridine in RNA Duplex by Phensinee Haruehanroengra, Sweta Vangaveti, Srivathsan V. Ranganathan, Song Mao, Max Daniel Su, Alan A. Chen, Jia Sheng

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Silver-mediated base pairings: towards dynamic DNA nanostructures with enhanced chemical and thermal stability by Steven M Swasey, Elisabeth G Gwinn

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Base-Pairs’ Correlated Oscillation Effects on the Charge Transfer in Double-Helix B-DNA Molecules by Enrique Maciá

“…By introducing a suitable renormalization process, the charge carrier and phonon dynamics of a double-stranded helical DNA molecule are expressed in terms of an effective Hamiltonian describing a linear chain, where the renormalized transfer integrals explicitly depend on the relative orientations of the Watson–Crick base pairs, and the renormalized on-site energies are related to the electronic parameters of consecutive base pairs along the helix axis, as well as to the low-frequency phonons’ dispersion relation. …”
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Dependence of Fluorescence Quenching of CY3 Oligonucleotide Conjugates on the Oxidation Potential of the Stacking Base Pair by Jens Sobek, Ralph Schlapbach

“…In a series of 7 nt hybrids, stacking interactions of CY3 with perfect match and mismatch base pairs were found to stabilise the hybrid by 7–8 kJ/mol. …”
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Theory of phase segregation in DNA assemblies containing two different base-pair sequence types by Dominic J (O’) Lee, Aaron Wynveen, Alexei A Kornyshev

“…Both oligomer types were of the same length and identical stoichiometric base-pair composition, but the base-pairs followed a different order. …”
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Cryo-EM structure of translesion DNA synthesis polymerase ζ with a base pair mismatch by Radhika Malik, Robert E. Johnson, Louise Prakash, Satya Prakash, Iban Ubarretxena-Belandia, Aneel K. Aggarwal

“…The structure of mismatched DNA-Polζ ternary complex provides a basis for understanding what makes Polζ adept at extending DNA synthesis past mismatched base pairs.…”
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Recognition of atypical 5' splice sites by shifted base-pairing to U1 snRNA by Krainer, Adrian R., Roca, Xavier

“…The 5' splice site (5' ss) — the highly diverse element at the 5' end of introns — is initially recognized via base-pairing to the 5' end of U1 small nuclear RNA (snRNA). …”
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Carboboration of isocyanates with tris(pentafluorophenyl)borane and evidence for dissociative FLP chemistry of an acid–base pair by Mehta, M, Goicoechea, J

Do C-H...O hydrogen bonds contribute to the stability of nucleic acid base pairs? by Leonard, G, McAuley-Hecht, K, Brown, T, Hunter, W

“…The possible formation of inter-base C-H.O hydrogen bonds in A.T, A.U and certain non-Watson-Crick base pairs is examined. …”

Molecular structure of the G.A base pair in DNA and its implications for the mechanism of transversion mutations. by Brown, T, Hunter, W, Kneale, G, Kennard, O

“…The sequence crystallizes as a full turn of a B-DNA helix and contains 2 purine X purine (G.A) base pairs and 10 Watson-Crick base pairs. The analysis shows conclusively that adenine is in the syn orientation with respect to the sugar moiety whereas guanine adopts the usual trans orientation. …”

Effects of structural variations on the hydrogen bond pairing between adenine derivatives and thymine by Valya Nikolova, Boris Galabov

Subjects: “…dna base pair, adenine, thymine, hydrogen bonding, electrostatic potential, atomic charges…”
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Cooperativity and Interdependency between RNA Structure and RNA–RNA Interactions by Ilias Skeparnias, Jinwei Zhang

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Prioritizing Factors Affecting Perspectives on Organizational Productivity via Paired Comparisons: Saipan Automotive Group by bahareh asadian, reza radfar, Abbas Toloie Eshlaghy

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Oligonucleosides with Integrated Backbone and Base: Foldamers with a Novel Architecture by Andrea T. Vasella

“…The results show that backbone-base integration defines a novel structural relation between backbone and nucleobases that favours selective pairing and leads to oligonucleotide foldamers. …”
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