Global Analysis of Gene Expression and Identification of Modules in Echinacea purpurea Using Systems Biology Approach by Ahmad Tahmasebi, Farzaneh Aram, Hassan Pakniyat, Ali Niazi, Elahe Tavakol, Esmaeil Ebrahimie

Subjects: “…co-expression analysis…”
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Genome-Wide Characterization of the GRAS Gene Family in <i>Cyclocarya paliurus</i> and Its Involvement in Heterodichogamy by Qian Wang, Yibo Yang, Yanhao Yu, Di Mei, Xia Mao, Xiangxiang Fu

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Genetic variation of aggrecanase-2 (ADAMTS5) in susceptibility to osteoarthritis by Xindie Zhou, Lifeng Jiang, Yi Zhang, Junjie Zhang, Dong Zhou, Lidong Wu, Yong Huang, Nanwei Xu

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Regulatory Modules of Metabolites and Protein Phosphorylation in Arabidopsis Genotypes With Altered Sucrose Allocation by Thorsten Stefan, Xu Na Wu, Youjun Zhang, Youjun Zhang, Alisdair Fernie, Alisdair Fernie, Waltraud X. Schulze

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Transcriptomic and metabolomic characterization of antibacterial activity of Melastoma dodecandrum by Wee Han Poh, Wee Han Poh, Nur Syahirah Ruhazat, Lay Kien Yang, Devendra Shivhare, Devendra Shivhare, Peng Ken Lim, Yoganathan Kanagasundaram, Scott A. Rice, Scott A. Rice, Marek Mutwil

Subjects: “…co-expression analysis…”
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Resolving stem and progenitor cells in the adult mouse incisor through gene co-expression analysis by Kerstin Seidel, Pauline Marangoni, Cynthia Tang, Bahar Houshmand, Wen Du, Richard L Maas, Steven Murray, Michael C Oldham, Ophir D Klein

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Transcriptional response of the white-rot fungus Dichomitus squalens to polysaccharides reveals a co-expression network of plant biomass conversion related genes by Victor M. Gonzalez Ramos, Astrid Mueller, Mao Peng, Megan Pawlowski, Anna Lipzen, Vivian Ng, Vasanth Singan, Mei Wang, Ronald P. de Vries, Igor V. Grigoriev, Joanna E. Kowalczyk, Miia R. Mäkelä

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Co-expression Networks From Gene Expression Variability Between Genetically Identical Seedlings Can Reveal Novel Regulatory Relationships by Sandra Cortijo, Sandra Cortijo, Marcel Bhattarai, James C. W. Locke, Sebastian E. Ahnert, Sebastian E. Ahnert, Sebastian E. Ahnert, Sebastian E. Ahnert

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Integrating machine learning with mendelian randomization for unveiling causal gene networks in glioblastoma multiforme by Lixin Du, Pan Wang, Xiaoting Qiu, Zhigang Li, Jianlan Ma, Pengfei Chen

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webCEMiTool: Co-expression Modular Analysis Made Easy by Lucas E. Cardozo, Pedro S. T. Russo, Bruno Gomes-Correia, Mariana Araujo-Pereira, Gonzalo Sepúlveda-Hermosilla, Vinicius Maracaja-Coutinho, Helder I. Nakaya

Subjects: “…co-expression analysis…”
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Co-expression network analysis of environmental canalization in the ascidian Ciona by Atsuko Sato, Gina M. Oba, Nathanael Aubert-Kato, Kei Yura, John Bishop

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Comprehensive analysis of key lncRNAs in ischemic stroke by Chunxiang Fan, Zouqin Huang, Binbin Chen, Baojin Chen, Qi Wang, Weidong Liu, Donghai Yu

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Identification of AUXIN RESPONSE FACTOR gene family from Prunus sibirica and its expression analysis during mesocarp and kernel development by Jun Niu, Quanxin Bi, Shuya Deng, Huiping Chen, Haiyan Yu, Libing Wang, Shanzhi Lin

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Analysis of protein-protein interaction and weighted co-expression networks revealed key modules and genes in multiple organs of Agave sisalana by Lucas M. Carvalho, Lucas M. Carvalho, Nicholas Vinícius Silva, Luís Guilherme F. de Abreu, Marina Püpke Marone, Alexandra Russolo Cardelli, Fabio Trigo Raya, Guido Araújo, Guido Araújo, Marcelo Falsarella Carazzolle, Marcelo Falsarella Carazzolle, Gonçalo Amarante Guimarães Pereira

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Comparative Transcriptome and Co-Expression Network Analyses Reveal the Molecular Mechanism of Calcium-Deficiency-Triggered Tipburn in Chinese Cabbage (<i>Brassica rapa</i> L. ssp.... by Shu Zhang, Hanzhong Gao, Lixia Wang, Yihui Zhang, Dandan Zhou, Ali Anwar, Jingjuan Li, Fengde Wang, Cheng Li, Ye Zhang, Jianwei Gao

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Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle by Wellison J. S. Diniz, Wellison J. S. Diniz, Wellison J. S. Diniz, Gianluca Mazzoni, Luiz L. Coutinho, Priyanka Banerjee, Ludwig Geistlinger, Ludwig Geistlinger, Aline S. M. Cesar, Francesca Bertolini, Juliana Afonso, Priscila S. N. de Oliveira, Polyana C. Tizioto, Haja N. Kadarmideen, Luciana C. A. Regitano

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Gene network analysis identifies dysregulated pathways in an autism spectrum disorder caused by mutations in Transcription Factor 4 by Lucas M. de Carvalho, Vinicius M. A. Carvalho, Antonio P. Camargo, Fabio Papes

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<i>RVE1</i>, <i>DBB1b</i>, and <i>COL2</i> Transcription Factors Are Responsive to Combined Stress by UV-B Radiation and Cold in Bell Pepper (<i>Capsicum annuum</i>) by Brandon Estefano Morales-Merida, Jesús Christian Grimaldi-Olivas, Abraham Cruz-Mendívil, Claudia Villicaña, José Benigno Valdez-Torres, José Basilio Heredia, Rubén León-Chan, Luis Alberto Lightbourn-Rojas, Josefina León-Félix

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A Network Approach of Gene Co-Expression in the Zea mays/Aspergillus flavus Pathosystem to Map Host/Pathogen Interaction Pathways. by Bryan Manyasi Musungu, Bryan Manyasi Musungu, Deepak Bhatnagar, Robert Lawrence Brown, Greg OBrian, Gary Payne, Matt Geisler, Ahmad Fakhoury

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Assessing immune infiltration and the tumor microenvironment for the diagnosis and prognosis of sarcoma by Naiqiang Zhu, Jingyi Hou

Subjects: “…Weighted gene co-expression analysis…”
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