Immunoinformatic identification of CD8+ T-cell epitopes by Lee, CH-J

Subjects: “…Computational immunology…”

Phenotypic modelling of the polyfunctional T cell response by Trendel, N

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Mathematical modelling and transcriptional characterisation of intratumoral regulatory T cell sub-populations by Muzhingi, I

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Design of a novel multi-epitope vaccine candidate against Yersinia pestis using advanced immunoinformatics approaches: An in silico study by Mohamed J. Saadh, Hanan Hassan Ahmed, Radhwan Abdul Kareem, Lalji Baldaniya, Lokesh Verma, G.V. Siva Prasad, Mamata Chahar, Waam Mohammed Taher, Mariem Alwan, Mahmood Jasem Jawad, Atheer Khdyair Hamad

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Protein-Based Immunome Wide Association Studies (PIWAS) for the Discovery of Significant Disease-Associated Antigens by Winston A. Haynes, Kathy Kamath, Rebecca Waitz, Patrick S. Daugherty, John C. Shon

Subjects: “…computational immunology…”
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A Poroelastic Approach for Modelling Myocardial Oedema in Acute Myocarditis by Wesley de Jesus Lourenço, Ruy Freitas Reis, Ricardo Ruiz-Baier, Ricardo Ruiz-Baier, Ricardo Ruiz-Baier, Bernardo Martins Rocha, Bernardo Martins Rocha, Rodrigo Weber dos Santos, Rodrigo Weber dos Santos, Marcelo Lobosco, Marcelo Lobosco

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Assessing the immunogenicity risk of salmon calcitonin peptide impurities using in silico and in vitro methods by Brian J. Roberts, Aimee E. Mattei, Kristina E. Howard, James L. Weaver, Hao Liu, Sandra Lelias, William D. Martin, Daniela Verthelyi, Eric Pang, Katie J. Edwards, Anne S. De Groot

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Immunopeptidomics toolkit library (IPTK): a python-based modular toolbox for analyzing immunopeptidomics data by Hesham ElAbd, Frauke Degenhardt, Tomas Koudelka, Ann-Kristin Kamps, Andreas Tholey, Petra Bacher, Tobias L. Lenz, Andre Franke, Mareike Wendorff

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LYMPH NODE INSPIRED COMPUTING: TOWARDS IMMUNE SYSTEM INSPIRED HUMAN-ENGINEERED COMPLEX SYSTEMS by Soumya Banerjee

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Age-Based Dynamics of a Stable Circulating Cd8 T Cell Repertoire Component by Elena N. Naumova, Maryam B. Yassai, Wendy Demos, Erica Reed, Melissa Unruh, Dipica Haribhai, Calvin B. Williams, Yuri N. Naumov, Jack Gorski

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Immune2vec: Embedding B/T Cell Receptor Sequences in ℝN Using Natural Language Processing by Miri Ostrovsky-Berman, Miri Ostrovsky-Berman, Boaz Frankel, Boaz Frankel, Pazit Polak, Pazit Polak, Gur Yaari, Gur Yaari

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Multi-Resolution Sensitivity Analysis of Model of Immune Response to Helicobacter pylori Infection via Spatio-Temporal Metamodeling by Xi Chen, Wenjing Wang, Guangrui Xie, Raquel Hontecillas, Meghna Verma, Meghna Verma, Andrew Leber, Josep Bassaganya-Riera, Vida Abedi, Vida Abedi

Subjects: “…computational immunology…”
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Clinical and Immunological Features of Human BCL10 Deficiency by Blanca Garcia-Solis, Blanca Garcia-Solis, Blanca Garcia-Solis, Ana Van Den Rym, Ana Van Den Rym, Ana Van Den Rym, Jareb J. Pérez-Caraballo, Jareb J. Pérez-Caraballo, Abdulwahab Al–Ayoubi, Anas M. Alazami, Lazaro Lorenzo, Carolina Cubillos-Zapata, Carolina Cubillos-Zapata, Eduardo López-Collazo, Antonio Pérez-Martínez, Antonio Pérez-Martínez, Luis M. Allende, Janet Markle, Janet Markle, Miguel Fernández-Arquero, Miguel Fernández-Arquero, Silvia Sánchez-Ramón, Silvia Sánchez-Ramón, Maria J. Recio, Maria J. Recio, Jean-Laurent Casanova, Jean-Laurent Casanova, Jean-Laurent Casanova, Jean-Laurent Casanova, Reem Mohammed, Reem Mohammed, Rubén Martinez-Barricarte, Rubén Martinez-Barricarte, Rebeca Pérez de Diego, Rebeca Pérez de Diego, Rebeca Pérez de Diego

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Computational modeling of heterogeneity and function of CD4+ T cells by Adria eCarbo, Adria eCarbo, Raquel eHontecillas, Raquel eHontecillas, Tricity eAndrew, Tricity eAndrew, Kristin eEden, Kristin eEden, Yongguo eMei, Yongguo eMei, Stefan eHoops, Josep eBassaganya-Riera, Josep eBassaganya-Riera, Josep eBassaganya-Riera

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Rapid Determination of HLA B*07 Ligands from the West Nile Virus NY99 Genome by Anne S. De Groot, Caitlin Saint-Aubin, Andrew Bosma, Hakima Sbai, James Rayner, William Martin

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A robust deep learning workflow to predict CD8 + T-cell epitopes by Chloe H. Lee, Jaesung Huh, Paul R. Buckley, Myeongjun Jang, Mariana Pereira Pinho, Ricardo A. Fernandes, Agne Antanaviciute, Alison Simmons, Hashem Koohy

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PANDORA: A Fast, Anchor-Restrained Modelling Protocol for Peptide: MHC Complexes by Dario F. Marzella, Farzaneh M. Parizi, Derek van Tilborg, Derek van Tilborg, Nicolas Renaud, Daan Sybrandi, Rafaella Buzatu, Daniel T. Rademaker, Peter A. C. ‘t Hoen, Li C. Xue

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Pre-training with a rational approach for antibody sequence representation by Xiangrui Gao, Changling Cao, Changling Cao, Chenfeng He, Lipeng Lai

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Development of an ancestral DC and TLR4-inducing multi-epitope peptide vaccine against the spike protein of SARS-CoV and SARS-CoV-2 using the advanced immunoinformatics approaches by Cena Aram, Parsa Alijanizadeh, Kiarash Saleki, Leila Karami

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A Validated Mathematical Model of the Cytokine Release Syndrome in Severe COVID-19 by Ruy Freitas Reis, Ruy Freitas Reis, Alexandre Bittencourt Pigozzo, Carla Rezende Barbosa Bonin, Barbara de Melo Quintela, Barbara de Melo Quintela, Lara Turetta Pompei, Ana Carolina Vieira, Larissa de Lima e Silva, Maicom Peters Xavier, Rodrigo Weber dos Santos, Rodrigo Weber dos Santos, Rodrigo Weber dos Santos, Marcelo Lobosco, Marcelo Lobosco, Marcelo Lobosco

Subjects: “…computational immunology…”
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