Computationally designed high specificity inhibitors delineate the roles of BCL2 family proteins in cancer by Stephanie Berger, Erik Procko, Daciana Margineantu, Erinna F Lee, Betty W Shen, Alex Zelter, Daniel-Adriano Silva, Kusum Chawla, Marco J Herold, Jean-Marc Garnier, Richard Johnson, Michael J MacCoss, Guillaume Lessene, Trisha N Davis, Patrick S Stayton, Barry L Stoddard, W Douglas Fairlie, David M Hockenbery, David Baker

Subjects: “…computational protein design…”
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An iterative computational design approach to increase the thermal endurance of a mesophilic enzyme by Deanne W. Sammond, Noah Kastelowitz, Bryon S. Donohoe, Markus Alahuhta, Vladimir V. Lunin, Daehwan Chung, Nicholas S. Sarai, Hang Yin, Ashutosh Mittal, Michael E. Himmel, Adam M. Guss, Yannick J. Bomble

Subjects: “…Computational protein design…”
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Improved interface packing and design opportunities revealed by CryoEM analysis of a designed protein nanocage by Stephen McCarthy, Shane Gonen

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Computational design of an apoptogenic protein that binds BCL-xL and MCL-1 simultaneously and potently by Seonghoon Kim, Hee-Sung Park, Byung-Ha Oh

Subjects: “…Computational protein design…”
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Sibe: a computation tool to apply protein sequence statistics to predict folding and design in silico by Ngaam J. Cheung, Wookyung Yu

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Targeting Viral Surface Proteins through Structure-Based Design by Yogesh B Narkhede, Karen J Gonzalez, Eva-Maria Strauch

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The Versatile Biocatalyst of Cytochrome P450 CYP102A1: Structure, Function, and Engineering by Yudong Sun, Xiaoqiang Huang, Yoichi Osawa, Yuqing Eugene Chen, Haoming Zhang

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DIProT: A deep learning based interactive toolkit for efficient and effective Protein design by Jieling He, Wenxu Wu, Xiaowo Wang

Subjects: “…Computational Protein design…”
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Guaranteed Diversity and Optimality in Cost Function Network Based Computational Protein Design Methods by Manon Ruffini, Jelena Vucinic, Simon de Givry, George Katsirelos, Sophie Barbe, Thomas Schiex

Subjects: “…computational protein design…”
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Protein re-surfacing of E. coli L-Asparaginase to evade pre-existing anti-drug antibodies and hypersensitivity responses by Ali Bootwala, Hyun Hwan An, Meghan Whitney Franklin, Benjamin J. Manning, Lucy Y. Xu, Shruti Panchal, Joseph D. Garlick, Reshica Baral, Michael E. Hudson, Gevorg Grigoryan, Mark A. Murakami, Kristen Hopson, Daniel S. Leventhal

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OptMAVEn-2.0: De novo Design of Variable Antibody Regions Against Targeted Antigen Epitopes by Ratul Chowdhury, Matthew F. Allan, Costas D. Maranas

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Supercharged cellulases show superior thermal stability and enhanced activity towards pretreated biomass and cellulose by Bhargava Nemmaru, Jenna Douglass, John M. Yarbrough, Antonio DeChellis, Srivatsan Shankar, Alina Thokkadam, Allan Wang, Shishir P. S. Chundawat

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Stabilization of the SARS-CoV-2 Spike Receptor-Binding Domain Using Deep Mutational Scanning and Structure-Based Design by Daniel Ellis, Daniel Ellis, Daniel Ellis, Natalie Brunette, Natalie Brunette, Katharine H. D. Crawford, Katharine H. D. Crawford, Katharine H. D. Crawford, Alexandra C. Walls, Minh N. Pham, Minh N. Pham, Chengbo Chen, Chengbo Chen, Karla-Luise Herpoldt, Karla-Luise Herpoldt, Brooke Fiala, Brooke Fiala, Michael Murphy, Michael Murphy, Deleah Pettie, Deleah Pettie, John C. Kraft, John C. Kraft, Keara D. Malone, Mary Jane Navarro, Cassandra Ogohara, Cassandra Ogohara, Elizabeth Kepl, Elizabeth Kepl, Rashmi Ravichandran, Rashmi Ravichandran, Claire Sydeman, Claire Sydeman, Maggie Ahlrichs, Maggie Ahlrichs, Max Johnson, Max Johnson, Alyssa Blackstone, Alyssa Blackstone, Lauren Carter, Lauren Carter, Tyler N. Starr, Allison J. Greaney, Allison J. Greaney, Allison J. Greaney, Kelly K. Lee, Kelly K. Lee, David Veesler, Jesse D. Bloom, Jesse D. Bloom, Jesse D. Bloom, Neil P. King, Neil P. King

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Functional Deimmunization of Interferon Beta-1b by Identifying and Silencing Human T Cells Epitopes by Amin Moradi Hasan-Abad, Elham Adabi, Esmaeil Sadroddiny, Mohammad Reza Khorramizadeh, Mohammad Ali Mazlomi, Saeed Mehravar, Gholam Ali Kardar

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COMPUTATIONAL APPROACHES FOR RATIONAL DESIGN OF PROTEINS WITH NOVEL FUNCTIONALITIES by Manish Kumar Tiwari, Ranjitha Singh, Raushan Kumar Singh, In-Won Kim, Jung-Kul Lee

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Computational approaches for rational design of proteins with novel functionalities by Manish Kumar Tiwari, Ranjitha Singh, Raushan Kumar Singh, In-Won Kim, Jung-Kul Lee

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Consistency principle for protein design by Rie Koga, Nobuyasu Koga

Subjects: “…computational protein design…”
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An integrated protein structure fitness scoring approach for identifying native-like model structures by Rahul Kaushik, Kam Y.J. Zhang

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