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1921
A Comprehensive Analysis of Chloroplast Genome Provides New Insights into the Evolution of the Genus <i>Chrysosplenium</i>
Published 2023-09-01“…In addition, we identified 10 mutational hotspot regions that could serve as potential DNA barcodes for <i>Chrysosplenium</i> species identification. …”
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1922
Comparative Analyses of Five Complete Chloroplast Genomes from the Genus <i>Pterocarpus</i> (Fabacaeae)
Published 2020-05-01“…In the five cp genomes of <i>Pterocarpus</i>, eight hypervariable regions, including trnH-GUG_psbA, trnS-UGA_psbC, accD-psaI, ndhI-exon2_ndhI-exon1, ndhG_ndhi-exon2, rpoC2-exon2, ccsA, and trnfM-CAU, are proposed for use as DNA barcode regions. In the comparison of gene selection pressures (<i>P. santalinus</i> as the reference genome), purifying selection was inferred as the primary mode of selection in maintaining important biological functions. …”
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1923
Comparative Genomics and Phylogenetic Analysis of the Chloroplast Genomes in Three Medicinal <i>Salvia</i> Species for Bioexploration
Published 2022-10-01“…Two pairs of genus-specific DNA barcode primers were found. The results will provide a solid foundation to understand the phylogenetic classification of the three <i>Salvia</i> species. …”
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1924
Biosystematic Study on Some Egyptian Species of <i>Astragalus</i> L. (Fabaceae)
Published 2021-02-01“…The current study includes the whole plant morphology, DNA barcode (ITS2), and molecular marker (SCoT). Ten taxa representing four species of <i>Astragalus</i> were collected from different localities in Egypt during the period from February 2018 to May 2019. …”
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1925
Integrative taxonomy of Nearctic and Palaearctic Aleocharinae: new species, synonymies, and records (Coleoptera, Staphylinidae)
Published 2021-05-01“…Recently, integrated study of the two regions through detailed morphological comparisons and development of an authoritatively identified DNA barcode reference library has revealed the degree to which these two aleocharine faunas are interconnected, both naturally and through human activity. …”
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1926
Phylogenomics and plastome evolution of Indigofera (Fabaceae)
Published 2023-06-01“…Thirteen highly variable regions were identified, of which trnK-rbcL, ndhF-trnL, and ycf1 were considered as candidate DNA barcodes for species identification of Indigofera. …”
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1927
Luminescent characteristics and mitochondrial COI barcodes of nine cohabitated Taiwanese fireflies
Published 2022-10-01“…The cytochrome oxidase I (COI) gene sequence was used as a DNA barcode to reveal the phylogenetic relationships of cohabitated species. …”
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1928
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1929
Chloroplast genome assembly of Serjania erecta Raldk: comparative analysis reveals gene number variation and selection in protein-coding plastid genes of Sapindaceae
Published 2023-09-01“…We identified 10 and 11 mutational hotspots for Sapindaceae and Sapindoideae, respectively, and identified six highly diverse regions (tRNA-Lys — rps16, ndhC – tRNA-Val, petA – psbJ, ndhF, rpl32 – ccsA, and ycf1) are found in both groups, which show potential for the development of DNA barcode markers for molecular taxonomic identification of Serjania. …”
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1930
Comparative Analysis and Characterization of Ten Complete Chloroplast Genomes of <i>Eremurus</i> Species (Asphodelaceae)
Published 2023-08-01“…Among the protein-coding genes, five highly variable genes (<i>ycf1</i>, <i>rps15</i>, <i>rps16</i>, and <i>rpl36</i>) with high Pi values were detected and showed potential as DNA barcodes for the genus. Three genes (<i>rps19</i>, <i>ycf1</i>, and <i>ndhB</i>) had positive Ka/Ks values. …”
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1931
Evolutionary and phylogenetic analyses of 11 Cerasus species based on the complete chloroplast genome
Published 2023-03-01“…These results provide new insights into the plastome evolution of Cerasus, along with potential molecular markers and candidate DNA barcodes for further phylogenetic and phylogeographic analyses of Cerasus species.…”
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1932
Genome-wide identification of colonisation determinants in rhizobium leguminosarum using BarSeq
Published 2021“…Through incorporation of a random DNA barcode into transposons RB-TnSeq allows barcode sequencing (BarSeq), which can be used to assay mutant fitness in a high throughput manner. …”
Thesis -
1933
ITS1 Barcode and Phytochemical Analysis by Gas Chromatography–Mass Spectrometry of <i>Corynaea crassa</i> Hook. f (Balanophoraceae) from Ecuador and Peru
Published 2022-12-01“…Moreover, characterization of medicinal plants through the use of DNA barcodes is an important tool for phylogenetic analysis and identification of species; furthermore, complemented with phytochemical analysis, both are useful for identification of plant species and quality control of medicinal products. …”
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1934
Analysis of Complete Chloroplast Genome: Structure, Phylogenetic Relationships of <i>Galega orientalis</i> and Evolutionary Inference of Galegeae
Published 2023-01-01“…A comparative genomic analysis of 15 Galegeae species showed that most conserved non-coding sequence regions and two genic regions (<i>ycf1</i> and <i>clpP</i>) were highly divergent, which could be used as DNA barcodes for rapid and accurate species identification. …”
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1935
Comparative Analysis of the Chloroplast Genomes of Eight Species of the Genus <i>Lirianthe</i> Spach with Its Generic Delimitation Implications
Published 2024-03-01“…DNA polymorphism analysis revealed 10 highly variable regions located in the large single-copy and small single-copy regions, among which <i>rpl32-trnL</i>, <i>petA-psbJ</i>, and <i>trnH-psbA</i> were the recommended candidate DNA barcodes for the genus <i>Lirianthe</i> species. …”
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1936
Complete Plastid Genome Sequencing of Eight Species from <i>Hansenia</i>, <i>Haplosphaera</i> and <i>Sinodielsia</i> (Apiaceae): Comparative Analyses and Phylogenetic Implications
Published 2020-11-01“…The <i>ndhG-ndhI</i> spacer regions were found in all three genera to have higher diversity values (Pi values: 0.01028–0.2), and thus may provide potential DNA barcodes in phylogenetic analysis. IR boundary analysis showed that the length of <i>rps19</i> and <i>ycf1</i> genes entering IRs were usually stable in the same genus. …”
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1937
Replacing mechanical protection with colorful faces–twice: parallel evolution of the non-operculate marine worm-snail genera Thylacodes (Guettard, 1770) and Cayo n. gen. (Gastropod...
Published 2023-10-01“…A new polychromatic species, Thylacodes bermudensis n. sp., is described from Bermuda and compared morphologically and by DNA barcode markers to the likewise polychromatic western Atlantic species T. decussatus (Gmelin, 1791). …”
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1938
Characterization of kaempferia species and activityguided selection of Kaempferia parviflora Wall. Ex baker for agronomic improvement
Published 2018“…ITS 4 and 5 sequences are proposed as DNA barcodes for identification of Kaempferia species. …”
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Thesis -
1939
Bionomics and host plants of the invasive Cydia interscindana (Möschler, 1866) (Lepidoptera, Tortricidae), an emerging pest in the Carpathian Lowlands
Published 2022-01-01“…The damage caused by the larvae, the external morphology of the adult male, larva, pupa (described for the first time) and pupal exuviae are presented. We also analyse DNA barcodes, identifying this pest for the first time via DNA sequencing of immature stages. …”
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