Virus variation resources at the National Center for Biotechnology Information: dengue virus by Rozanov Michael, Kiryutin Boris, Zaslavsky Leonid, Resch Wolfgang, Bao Yiming, Tatusova Tatiana A

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Authentication of Aspergillus parasiticus strains in the genome database of the National Center for Biotechnology Information by Perng-Kuang Chang

“…Aspergillus strains erroneously curated as Aspergillus oryzae and Aspergillus fumigatus have been noticed in the National Center for Biotechnology Information (NCBI) genome database. …”
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The CAIRR Pipeline for Submitting Standards-Compliant B and T Cell Receptor Repertoire Sequencing Studies to the National Center for Biotechnology Information Repositories by Syed Ahmad Chan Bukhari, Martin J. O’Connor, Marcos Martínez-Romero, Attila L. Egyedi, Debra Willrett, John Graybeal, Mark A. Musen, Florian Rubelt, Kei-Hoi Cheung, Kei-Hoi Cheung, Kei-Hoi Cheung, Steven H. Kleinstein, Steven H. Kleinstein

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Bioinformatics : A Practical Guide to NCBI Databases and Sequence Alignments / by Ismail, Hamid D., author 650263, National Center for Biotechnology Information (U.S.) 650269

New Exon Prediction Techniques Using Adaptive Signal Processing Algorithms for Genomic Analysis by Srinivasareddy Putluri, Md. Zia Ur Rahman, Chandra Sekhar Amara, Nagireddy Putluri

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In silico analysis and structural prediction of a hypothetical protein from Leishmania major by Achisha Saikia, Duhita Akhil Palherkar, Lingayya Hiremath

Subjects: “…national center for biotechnology information…”
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Computational analysis of SARS-CoV-2, SARS-CoV, and MERS-CoV genome using MEGA by Vipan Kumar Sohpal

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Evolution of biomedical communication as reflected by the National Library of Medicine by Susan Y. Crawford

Subjects: “…National Library of Medicine, National Center for Biotechnology Information, PubMed, Lister Hill National Center for Biomedical Communications, Human Genome Project…”
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PAirwise Sequence Comparison (PASC) and Its Application in the Classification of Filoviruses by Tatiana Tatusova, Vyacheslav Chetvernin, Yiming Bao

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Rapid and sensitive detection of genome contamination at scale with FCS-GX by Alexander Astashyn, Eric S. Tvedte, Deacon Sweeney, Victor Sapojnikov, Nathan Bouk, Victor Joukov, Eyal Mozes, Pooja K. Strope, Pape M. Sylla, Lukas Wagner, Shelby L. Bidwell, Larissa C. Brown, Karen Clark, Emily W. Davis, Brian Smith-White, Wratko Hlavina, Kim D. Pruitt, Valerie A. Schneider, Terence D. Murphy

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A global reference for human genetic variation by The 1000 Genomes Project Consortium, Gabriel, Stacey, Lander, Eric Steven, Banks, Eric, Bhatia, Gaurav, Kashin, Seva, McCarroll, Steven A, Nemesh, James, Poplin, Ryan E., Sabeti, Pardis, Shlyakhter, Ilya, Schaffner, Stephen F, Vitti, Joseph, Hartler, Christina M., Tariyal, Ridhi, Daly, Mark J., Gymrek, Melissa A.

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STAT: a fast, scalable, MinHash-based k-mer tool to assess Sequence Read Archive next-generation sequence submissions by Kenneth S. Katz, Oleg Shutov, Richard Lapoint, Michael Kimelman, J. Rodney Brister, Christopher O’Sullivan

“…Abstract Sequence Read Archive submissions to the National Center for Biotechnology Information often lack useful metadata, which limits the utility of these submissions. …”
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Analysis of metagenome-assembled viral genomes from the human gut reveals diverse putative CrAss-like phages with unique genomic features by Natalya Yutin, Sean Benler, Sergei A. Shmakov, Yuri I. Wolf, Igor Tolstoy, Mike Rayko, Dmitry Antipov, Pavel A. Pevzner, Eugene V. Koonin

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PUG-View: programmatic access to chemical annotations integrated in PubChem by Sunghwan Kim, Paul A. Thiessen, Tiejun Cheng, Jian Zhang, Asta Gindulyte, Evan E. Bolton

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Gene gain and loss push prokaryotes beyond the homologous recombination barrier and accelerate genome sequence divergence by Jaime Iranzo, Yuri I. Wolf, Eugene V. Koonin, Itamar Sela

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Classical Oncogenes and Tumor Suppressor Genes: A Comparative Genomics Perspective by Oxana K. Pickeral, Jonathan Z. Li, Ian Barrow, Mark S. Boguski, Wojciech Makałowski, Jiong Zhang

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ElasticBLAST: accelerating sequence search via cloud computing by Christiam Camacho, Grzegorz M. Boratyn, Victor Joukov, Roberto Vera Alvarez, Thomas L. Madden

“…It can search BLAST databases that are user provided or from the National Center for Biotechnology Information. Conclusion We show that ElasticBLAST is a useful application that can efficiently perform BLAST searches for the user in the cloud, demonstrating that with two examples. …”
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A graphical user interface for RAId, a knowledge integrated proteomics analysis suite with accurate statistics by Brendan Joyce, Danny Lee, Alex Rubio, Aleksey Ogurtsov, Gelio Alves, Yi-Kuo Yu

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Ribovore: ribosomal RNA sequence analysis for GenBank submissions and database curation by Alejandro A. Schäffer, Richard McVeigh, Barbara Robbertse, Conrad L. Schoch, Anjanette Johnston, Beverly A. Underwood, Ilene Karsch-Mizrachi, Eric P. Nawrocki

“…Because of their popularity, the National Center for Biotechnology Information (NCBI) receives a disproportionate number of rRNA sequence submissions and BLAST queries. …”
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Interplay between DNA damage repair and apoptosis shapes cancer evolution through aneuploidy and microsatellite instability by Noam Auslander, Yuri I. Wolf, Eugene V. Koonin

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