Hybrid metagenome assemblies link carbohydrate structure with function in the human gut microbiome by Anuradha Ravi, Perla Troncoso-Rey, Jennifer Ahn-Jarvis, Kendall R. Corbin, Suzanne Harris, Hannah Harris, Alp Aydin, Gemma L. Kay, Thanh Le Viet, Rachel Gilroy, Mark J. Pallen, Andrew J. Page, Justin O’Grady, Frederick J. Warren

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CoronaHiT: high-throughput sequencing of SARS-CoV-2 genomes by Dave J. Baker, Alp Aydin, Thanh Le-Viet, Gemma L. Kay, Steven Rudder, Leonardo de Oliveira Martins, Ana P. Tedim, Anastasia Kolyva, Maria Diaz, Nabil-Fareed Alikhan, Lizzie Meadows, Andrew Bell, Ana Victoria Gutierrez, Alexander J. Trotter, Nicholas M. Thomson, Rachel Gilroy, Luke Griffith, Evelien M. Adriaenssens, Rachael Stanley, Ian G. Charles, Ngozi Elumogo, John Wain, Reenesh Prakash, Emma Meader, Alison E. Mather, Mark A. Webber, Samir Dervisevic, Andrew J. Page, Justin O’Grady

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Author Correction: Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus by Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E. M. Stevenson, Martin Rejzek, Petr Novák, Marielle Vigouroux, Martin Vickers, Roland H. M. Wouters, Pirita Paajanen, Burkhard Steuernagel, Jonathan D. Moore, Janet Higgins, David Swarbreck, Stefan Martens, Colin Y. Kim, Jing-Ke Weng, Sagadevan Mundree, Benjamin Kilian, Shiv Kumar, Matt Loose, Levi Yant, Jiří Macas, Trevor L. Wang, Cathie Martin, Peter M. F. Emmrich

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Aeciospore ejection in the rust pathogen Puccinia graminis is driven by moisture ingress by Vanessa Bueno-Sancho, Elizabeth S. Orton, Morgan Gerrity, Clare M. Lewis, Phoebe Davey, Kim C. Findlay, Elaine Barclay, Phil Robinson, Richard J. Morris, Mark Blyth, Diane G. O. Saunders

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Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus by Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E. M. Stevenson, Martin Rejzek, Petr Novák, Marielle Vigouroux, Martin Vickers, Roland H. M. Wouters, Pirita Paajanen, Burkhard Steuernagel, Jonathan D. Moore, Janet Higgins, David Swarbreck, Stefan Martens, Colin Y. Kim, Jing-Ke Weng, Sagadevan Mundree, Benjamin Kilian, Shiv Kumar, Matt Loose, Levi Yant, Jiří Macas, Trevor L. Wang, Cathie Martin, Peter M. F. Emmrich

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Evidence to Underpin Vitamin A Requirements and Upper Limits in Children Aged 0 to 48 Months: A Scoping Review by Lee Hooper, Chizoba Esio-Bassey, Julii Brainard, Judith Fynn, Amy Jennings, Natalia Jones, Bhavesh V. Tailor, Asmaa Abdelhamid, Calvin Coe, Latife Esgunoglu, Ciara Fallon, Ernestina Gyamfi, Claire Hill, Stephanie Howard Wilsher, Nithin Narayanan, Titilopemi Oladosu, Ellice Parkinson, Emma Prentice, Meysoon Qurashi, Luke Read, Harriet Getley, Fujian Song, Ailsa A. Welch, Peter Aggett, Georg Lietz

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A systems genomics approach to uncover patient-specific pathogenic pathways and proteins in ulcerative colitis by Johanne Brooks-Warburton, Dezso Modos, Padhmanand Sudhakar, Matthew Madgwick, John P. Thomas, Balazs Bohar, David Fazekas, Azedine Zoufir, Orsolya Kapuy, Mate Szalay-Beko, Bram Verstockt, Lindsay J. Hall, Alastair Watson, Mark Tremelling, Miles Parkes, Severine Vermeire, Andreas Bender, Simon R. Carding, Tamas Korcsmaros

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Chromosome-level genome sequence of the Genetically Improved Farmed Tilapia (GIFT, Oreochromis niloticus) highlights regions of introgression with O. mossambicus by G. J. Etherington, W. Nash, A. Ciezarek, T. K. Mehta, A. Barria, C. Peñaloza, M. G. Q. Khan, A. Durrant, N. Forrester, F. Fraser, N. Irish, G. G. Kaithakottil, J. Lipscombe, T. Trong, C. Watkins, D. Swarbreck, E. Angiolini, A. Cnaani, K. Gharbi, R. D. Houston, J. A. H. Benzie, W. Haerty

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Erratum to: Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species by Thomas C. Mathers, Yazhou Chen, Gemy Kaithakottil, Fabrice Legeai, Sam T. Mugford, Patrice Baa-Puyoulet, Anthony Bretaudeau, Bernardo Clavijo, Stefano Colella, Olivier Collin, Tamas Dalmay, Thomas Derrien, Honglin Feng, Toni Gabaldón, Anna Jordan, Irene Julca, Graeme J. Kettles, Krissana Kowitwanich, Dominique Lavenier, Paolo Lenzi, Sara Lopez-Gomollon, Damian Loska, Daniel Mapleson, Florian Maumus, Simon Moxon, Daniel R. G. Price, Akiko Sugio, Manuella van Munster, Marilyne Uzest, Darren Waite, Georg Jander, Denis Tagu, Alex C. C. Wilson, Cock van Oosterhout, David Swarbreck, Saskia A. Hogenhout

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Unravelling the specificity and mechanism of sialic acid recognition by the gut symbiont Ruminococcus gnavus by C. David Owen, Louise E. Tailford, Serena Monaco, Tanja Šuligoj, Laura Vaux, Romane Lallement, Zahra Khedri, Hai Yu, Karine Lecointe, John Walshaw, Sandra Tribolo, Marc Horrex, Andrew Bell, Xi Chen, Gary L. Taylor, Ajit Varki, Jesus Angulo, Nathalie Juge

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Absence of warmth permits epigenetic memory of winter in Arabidopsis by Jo Hepworth, Rea L. Antoniou-Kourounioti, Rebecca H. Bloomer, Catja Selga, Kristina Berggren, Deborah Cox, Barley R. Collier Harris, Judith A. Irwin, Svante Holm, Torbjörn Säll, Martin Howard, Caroline Dean

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Antibiotic-induced disturbances of the gut microbiota result in accelerated breast tumor growth by Alastair M. McKee, Benjamin M. Kirkup, Matthew Madgwick, Wesley J. Fowler, Christopher A. Price, Sally A. Dreger, Rebecca Ansorge, Kate A. Makin, Shabhonam Caim, Gwenaelle Le Gall, Jack Paveley, Charlotte Leclaire, Matthew Dalby, Cristina Alcon-Giner, Anna Andrusaite, Tzu-Yu Feng, Martina Di Modica, Tiziana Triulzi, Elda Tagliabue, Simon W.F. Milling, Katherine N. Weilbaecher, Melanie R. Rutkowski, Tamás Korcsmáros, Lindsay J. Hall, Stephen D. Robinson

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Absence of the primary cilia formation gene Talpid3 impairs muscle stem cell function by Victor Martinez-Heredia, Danielle Blackwell, Sujith Sebastian, Timothy Pearson, Gi Fay Mok, Laura Mincarelli, Charlotte Utting, Leighton Folkes, Ernst Poeschl, Iain Macaulay, Ulrike Mayer, Andrea Münsterberg

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Characterising open chromatin in chick embryos identifies cis-regulatory elements important for paraxial mesoderm formation and axis extension by Gi Fay Mok, Leighton Folkes, Shannon A. Weldon, Eirini Maniou, Victor Martinez-Heredia, Alice M. Godden, Ruth M. Williams, Tatjana Sauka-Spengler, Grant N. Wheeler, Simon Moxon, Andrea E. Münsterberg

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A haplotype-led approach to increase the precision of wheat breeding by Jemima Brinton, Ricardo H. Ramirez-Gonzalez, James Simmonds, Luzie Wingen, Simon Orford, Simon Griffiths, 10 Wheat Genome Project, Georg Haberer, Manuel Spannagl, Sean Walkowiak, Curtis Pozniak, Cristobal Uauy

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Reconstitution of monoterpene indole alkaloid biosynthesis in genome engineered Nicotiana benthamiana by Quentin M. Dudley, Seohyun Jo, Delia Ayled Serna Guerrero, Monika Chhetry, Mark A. Smedley, Wendy A. Harwood, Nathaniel H. Sherden, Sarah E. O’Connor, Lorenzo Caputi, Nicola J. Patron

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Lessons in Effector and NLR Biology of Plant-Microbe Systems by Aleksandra Białas, Erin K. Zess, Juan Carlos De la Concepcion, Marina Franceschetti, Helen G. Pennington, Kentaro Yoshida, Jessica L. Upson, Emilie Chanclud, Chih-Hang Wu, Thorsten Langner, Abbas Maqbool, Freya A. Varden, Lida Derevnina, Khaoula Belhaj, Koki Fujisaki, Hiromasa Saitoh, Ryohei Terauchi, Mark J. Banfield, Sophien Kamoun

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RNA G-quadruplex structure contributes to cold adaptation in plants by Xiaofei Yang, Haopeng Yu, Susan Duncan, Yueying Zhang, Jitender Cheema, Haifeng Liu, J. Benjamin Miller, Jie Zhang, Chun Kit Kwok, Huakun Zhang, Yiliang Ding

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Integrative analysis of Paneth cell proteomic and transcriptomic data from intestinal organoids reveals functional processes dependent on autophagy by Emily J. Jones, Zoe J. Matthews, Lejla Gul, Padhmanand Sudhakar, Agatha Treveil, Devina Divekar, Jasmine Buck, Tomasz Wrzesinski, Matthew Jefferson, Stuart D. Armstrong, Lindsay J. Hall, Alastair J. M. Watson, Simon R. Carding, Wilfried Haerty, Federica Di Palma, Ulrike Mayer, Penny P. Powell, Isabelle Hautefort, Tom Wileman, Tamas Korcsmaros

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Single-cell gene and isoform expression analysis reveals signatures of ageing in haematopoietic stem and progenitor cells by Laura Mincarelli, Vladimir Uzun, David Wright, Anita Scoones, Stuart A. Rushworth, Wilfried Haerty, Iain C. Macaulay

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