MIA-Sig: multiplex chromatin interaction analysis by signal processing and statistical algorithms by Minji Kim, Meizhen Zheng, Simon Zhongyuan Tian, Byoungkoo Lee, Jeffrey H. Chuang, Yijun Ruan

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Cisplatin-resistant triple-negative breast cancer subtypes: multiple mechanisms of resistance by David P. Hill, Akeena Harper, Joan Malcolm, Monica S. McAndrews, Susan M. Mockus, Sara E. Patterson, Timothy Reynolds, Erich J. Baker, Carol J. Bult, Elissa J. Chesler, Judith A. Blake

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A <i>Dpagt1</i> Missense Variant Causes Degenerative Retinopathy without Myasthenic Syndrome in Mice by Lillian F. Hyde, Yang Kong, Lihong Zhao, Sriganesh Ramachandra Rao, Jieping Wang, Lisa Stone, Andrew Njaa, Gayle B. Collin, Mark P. Krebs, Bo Chang, Steven J. Fliesler, Patsy M. Nishina, Jürgen K. Naggert

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Comprehensive Evaluation of the 5XFAD Mouse Model for Preclinical Testing Applications: A MODEL-AD Study by Adrian L. Oblak, Adrian L. Oblak, Peter B. Lin, Kevin P. Kotredes, Ravi S. Pandey, Dylan Garceau, Harriet M. Williams, Asli Uyar, Rita O’Rourke, Sarah O’Rourke, Cynthia Ingraham, Daria Bednarczyk, Melisa Belanger, Zackary A. Cope, Gabriela J. Little, Sean-Paul G. Williams, Carl Ash, Adam Bleckert, Tim Ragan, Benjamin A. Logsdon, Lara M. Mangravite, Stacey J. Sukoff Rizzo, Paul R. Territo, Paul R. Territo, Gregory W. Carter, Gareth R. Howell, Michael Sasner, Bruce T. Lamb, Bruce T. Lamb

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Severity of Demyelinating and Axonal Neuropathy Mouse Models Is Modified by Genes Affecting Structure and Function of Peripheral Nodes by Kathryn H. Morelli, Kevin L. Seburn, David G. Schroeder, Emily L. Spaulding, Loiuse A. Dionne, Gregory A. Cox, Robert W. Burgess

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Identification of EOMES-expressing spermatogonial stem cells and their regulation by PLZF by Manju Sharma, Anuj Srivastava, Heather E Fairfield, David Bergstrom, William F Flynn, Robert E Braun

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Trackable and scalable LC-MS metabolomics data processing using asari by Shuzhao Li, Amnah Siddiqa, Maheshwor Thapa, Yuanye Chi, Shujian Zheng

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A novel treatment strategy for lapatinib resistance in a subset of HER2-amplified gastric cancer by Gang Ning, Qihui Zhu, Wonyoung Kang, Hamin Lee, Leigh Maher, Yun-Suhk Suh, Michael Michaud, Mayerlin Silva, Jee Young Kwon, Chengsheng Zhang, Charles Lee

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Glucose oxidation-dependent survival of activated B cells provides a putative novel therapeutic target for lupus treatment by John J. Wilson, Jian Wei, Andrea R. Daamen, John D. Sears, Elaine Bechtel, Colleen L. Mayberry, Grace A. Stafford, Lesley Bechtold, Amrie C. Grammer, Peter E. Lipsky, Derry C. Roopenian, Chih-Hao Chang

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Genetic Interaction between <i>Mfrp</i> and <i>Adipor1</i> Mutations Affect Retinal Disease Phenotypes by Navdeep Gogna, Sonia Weatherly, Fuxin Zhao, Gayle B. Collin, Jai Pinkney, Lisa Stone, Jürgen K. Naggert, Gregory W. Carter, Patsy M. Nishina

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Spatiotemporally organized immunomodulatory response to SARS-CoV-2 virus in primary human broncho-alveolar epithelia by Diana Cadena Castaneda, Sonia Jangra, Marina Yurieva, Jan Martinek, Megan Callender, Matthew Coxe, Angela Choi, Juan García-Bernalt Diego, Jianan Lin, Te-Chia Wu, Florentina Marches, Damien Chaussabel, Peter Yu, Andrew Salner, Gabrielle Aucello, Jonathan Koff, Briana Hudson, Sarah E. Church, Kara Gorman, Esperanza Anguiano, Adolfo García-Sastre, Adam Williams, Michael Schotsaert, Karolina Palucka

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Four additional mouse crosses improve the lipid QTL landscape and identify Lipg as a QTL gene[S] by Zhiguang Su, Naoki Ishimori, Yaoyu Chen, Edward H. Leiter, Gary A. Churchill, Beverly Paigen, Ioannis M. Stylianou

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A Splicing Mutation in <i>Slc4a5</i> Results in Retinal Detachment and Retinal Pigment Epithelium Dysfunction by Gayle B. Collin, Lanying Shi, Minzhong Yu, Nurten Akturk, Jeremy R. Charette, Lillian F. Hyde, Sonia M. Weatherly, Martin F. Pera, Jürgen K. Naggert, Neal S. Peachey, Patsy M. Nishina, Mark P. Krebs

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Protocol for establishing primary human lung organoid-derived air-liquid interface cultures from cryopreserved human lung tissue by Diana Cadena Castaneda, Sonia Jangra, Marina Yurieva, Jan Martinek, Megan Callender, Matthew Coxe, Angela Choi, Juan García-Bernalt Diego, Te-Chia Wu, Florentina Marches, Damien Chaussabel, Adolfo García-Sastre, Michael Schotsaert, Adam Williams, Karolina Palucka

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JAX-CNV: A Whole-genome Sequencing-based Algorithm for Copy Number Detection at Clinical Grade Level by Wan-Ping Lee, Qihui Zhu, Xiaofei Yang, Silvia Liu, Eliza Cerveira, Mallory Ryan, Adam Mil-Homens, Lauren Bellfy, Kai Ye, Charles Lee, Chengsheng Zhang

“…JAX-CNV is available at https://github.com/TheJacksonLaboratory/JAX-CNV.…”
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Single-Cell RNA Sequencing Reveals Molecular Features of Heterogeneity in the Murine Retinal Pigment Epithelium by Ravi S. Pandey, Mark P. Krebs, Mohan T. Bolisetty, Jeremy R. Charette, Jürgen K. Naggert, Paul Robson, Patsy M. Nishina, Gregory W. Carter

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DNA methylation-calling tools for Oxford Nanopore sequencing: a survey and human epigenome-wide evaluation by Yang Liu, Wojciech Rosikiewicz, Ziwei Pan, Nathaniel Jillette, Ping Wang, Aziz Taghbalout, Jonathan Foox, Christopher Mason, Martin Carroll, Albert Cheng, Sheng Li

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A Contraction Stress Model of Hypertrophic Cardiomyopathy due to Sarcomere Mutations by Rachel Cohn, Ketan Thakar, Andre Lowe, Feria A. Ladha, Anthony M. Pettinato, Robert Romano, Emily Meredith, Yu-Sheng Chen, Katherine Atamanuk, Bryan D. Huey, J. Travis Hinson

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Effects of dietary fats from animal and plant sources on diet-induced fatty streak lesions in C57BL/6J mice by PM Nishina, S Lowe, J Verstuyft, JK Naggert, FA Kuypers, B Paigen

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Action detection using a neural network elucidates the genetics of mouse grooming behavior by Brian Q Geuther, Asaf Peer, Hao He, Gautam Sabnis, Vivek M Philip, Vivek Kumar

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