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61
Transcriptomic changes in the microsporidia proliferation and host responses in congenitally infected embryos and larvae
Published 2024-04-01“…Interestingly, a large number of distinct or shared differentially expressed genes (DEGs) were revealed by the Venn diagram and heat map, many of them were connected to infection related factors such as Ricin B lectin, spore wall protein, polar tube protein, and polysaccharide deacetylase. …”
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62
Identification of a key glioblastoma candidate gene, FUBP3, based on weighted gene co-expression network analysis
Published 2022-04-01“…WGCNA was performed to construct a gene co-expression network in the GEO glioblastoma samples. A custom Venn diagram website was used to find the intersecting genes. …”
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63
Model of Heritage Interpretation Adapted to Public Co-participation
Published 2023-09-01“…The paper concludes by outlining the heritage interpretation model, graphically presented in two diagrams: the structural one in the form of a three-circle Venn diagram with the corresponding matrix and the process diagram following the adaptive management pattern. …”
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64
Revising the DIKW Pyramid and the Real Relationship Between Data, Information, Knowledge and Wisdom
Published 2020-11-01“…This paper examines the traditional DIKW pyramid and proposes a revised DIKW relationship based on a Venn diagram to better reflect the relationship between data, information, knowledge, and wisdom.…”
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65
Bioinformatics prediction and experimental verification of key biomarkers for diabetic kidney disease based on transcriptome sequencing in mice
Published 2022-09-01“…At the same time, 183 up-regulated and 153 down-regulated DEGs were obtained in GEO database GSE86300, and 76 up-regulated and 117 down-regulated DEGs were obtained in GSE184836. Venn diagram showed that 13 co-expression DEGs among the three groups of DEGs. …”
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66
Exosomal miR-122-5p is Related to the Degree of Myelosuppression Caused by Chemotherapy in Patients with Colorectal Cancer
Published 2021-11-01“…Small RNA sequencing was also used to investigate differentially expressed exosomal miRNAs among these groups, and exosomal miRNAs related to myelosuppression after chemotherapy was explored using a Venn diagram. RT-qPCR was applied to further verify the sequencing results. …”
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67
Bayesian and frequentist analysis of True and Error models
Published 2019-09-01“…The partially nested inter-relations among the six TE models are represented in a Venn diagram. Another view of model complexity is presented in terms of possible sets of data that could fit a model rather than in terms of possible sets of parameters that do or do not fit a given set of data. …”
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68
Transcriptome data and gene ontology analysis in human macrophages ingesting modified lipoproteins in the presence or absence of complement protein C1q
Published 2016-12-01“…Data presented here include Venn diagram overviews of up- and down-regulated genes for each condition tested, gene ontology analyses of biological processes, molecular functions and cellular components and KEGG pathway analysis. …”
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69
MATHEMATICAL REPRESENTATION OF GRADE 7 STUDENTS IN SET THEORY TOPICS THROUGH PROBLEM-BASED LEARNING
Published 2020-02-01“…They could use the symbol of set correctly, represent the set into Venn diagram correctly and they also could explain their answer. …”
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70
Adding wind power to a wind‐rich grid: Evaluating secondary suitability metrics
Published 2023-05-01“…Specifically, locations with low correlation to existing wind farms, locations with high correlation to load, locations with high characteristic power time‐shift from existing wind farms, and locations that relieve or do not negatively impact electricity transmission congestion are identified. A geospatial Venn diagram‐based method of visualization is presented. …”
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71
Gene finding in the chicken genome
Published 2005-05-01“…</p> <p>Results</p> <p>We performed experimental evaluation by RT-PCR of three different computational gene finders, Ensembl, SGP2 and TWINSCAN, applied to the chicken genome. A Venn diagram was computed and each component of it was evaluated. …”
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72
Bayesian and frequentist analysis of True and Error models
Published 2019-09-01“…The partially nested inter-relations among the six TE models are represented in a Venn diagram. Another view of model complexity is presented in terms of possible sets of data that could fit a model rather than in terms of possible sets of parameters that do or do not fit a given set of data. …”
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73
Data set from the phosphoproteomic analysis of Magnaporthe oryzae-responsive proteins in susceptible and resistant rice cultivars
Published 2015-06-01“…We report the analysis of M. oryzae-regulated phosphoproteins at all time points, including Venn diagram analysis, close-up views, relative intensities, and functional category, and the MS spectra of representative phosphoprotein and representative phosphorylated peptides.…”
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74
Factors Affecting the Language Learning of EFL Students Through ABC Model: A Cross Cultural Analysis
Published 2018-03-01“…This study applies qualitative method based on the descriptive data, and are analyzed by using cultural analysis of differences and similarities taken from the ‘Venn Diagram’ between autobiographies of the participants and biographies of their partner. …”
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75
Identification of hub genes in colon cancer via bioinformatics analysis
Published 2020-09-01“…Methods Differentially expressed genes (DEGs) of expression profiles (GSE33113, GSE20916, and GSE37364) obtained from Gene Expression Omnibus (GEO) were identified using the GEO2R tool and Venn diagram software. Function and pathway enrichment analyses were performed, and a protein–protein interaction (PPI) network was constructed. …”
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76
Socio-Economic and environmental indicators: do they go hand in hand or back to back? A zoom into SDG7
Published 2023-07-01“…With Eurostat data for 27 countries for the share of households unable to keep homes warm, energy dependency and the share of renewables, we use correlations and scatter (for pairs) and the Venn diagram (for the combination of the three). Results show a diversity of synergistic or trade-off paths, making clear that the solutions to improve the progress in SDG 7 cannot be the same for all Member States and that even the most urgent measures in a domain should not compromise advancements in others. …”
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77
Vector analysis as a fast and easy method to compare gene expression responses between different experimental backgrounds
Published 2005-07-01“…Usually, results of such experiments are presented in the form of Venn diagrams, which are intuitive and visually appealing, but lack a statistical foundation.…”
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78
Organizational Capacity Assessment of Herbs, a Rural-Based Farmer Organization in San Pablo City, Laguna, Philippines
Published 2019-07-01“…Focused Group Discussion using PRA tools such as Livelihood analysis, Venn Diagram, SWOT and TOWS analysis, Problem Tree analysis, and Logical Framework Matrix was used in conducting this study. …”
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79
The Identification of Immune-Related Biomarkers for Osteoarthritis Immunotherapy Based on Single-Cell RNA Sequencing Analysis
Published 2023-01-01“…By performing the differentially expressed analysis, we successfully obtain the genes that are closely associated with the OA. In addition, the Venn diagram was applied to evaluate the genes that are involved in OA and immune-related genes. …”
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Identification of differentially expressed genes between mucinous adenocarcinoma and other adenocarcinoma of colorectal cancer using bioinformatics analysis
Published 2020-08-01“…Results The DEGs were mainly enriched in negative regulation of cell proliferation, bicarbonate transport, response to peptide hormone, cell–cell signaling, cell proliferation, and positive regulation of the canonical Wnt signaling pathway. The Venn diagram revealed eight significant hub genes: CXCL9 , IDO1 , MET , SNAI2 , and ZEB2 were highly expressed in MC compared with AC, whereas AREG , TWIST1 , and ZEB1 were expressed at a low level. …”
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