In Silico Analysis of Toehold-Aptamer Sequences Targeting the SARS-CoV-2 Nucleocapsid Protein Gene for Biosensor Development by Karla M. Esquivel-Ortiz, Aurora Antonio-Pérez, Ana L. Torres-Huerta

“…We performed in silico analysis of three toehold-aptamer sequences targeting the SARS-CoV-2 nucleocapsid protein gene, with secondary and tertiary structures modeled using mFold and RNAComposer web servers. Molecular docking simulations were challenging due to computational and molecular constraints. …”
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Independent Component Analysis And Rough Fuzzy Based Approach To Web Usage Mining by Chimphlee, Siriporn, Salim, Naomie, Ngadiman, Mohd. Salihin, Chimphlee, Witcha, Srinoy, Surat

“…Web Usage Mining is that area of Web Mining which deals with the extraction of interesting knowledge from logging information produced by Web servers. A challenge in web classification is how to deal with the high dimensionality of the feature space. …”
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C3: Consensus Cancer Driver Gene Caller by Chen-Yu Zhu, Chi Zhou, Yun-Qin Chen, Ai-Zong Shen, Zong-Ming Guo, Zhao-Yi Yang, Xiang-Yun Ye, Shen Qu, Jia Wei, Qi Liu

“…Keywords: Somatic mutation, Cancer driver genes, Consensus, Data integration, Web server…”
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Linux Distributions on IAAS Providers: A Performance Analysis for E-Commerce Hosting by Contti, M. F., Freitas, B. P. T., Lazarin, N. M.

“…Those systems need an infrastructure consisting of web servers, data stores, network equipment, and more, which can be costly to maintain. …”
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Exploring the Binding Interaction of Raf Kinase Inhibitory Protein With the N-Terminal of C-Raf Through Molecular Docking and Molecular Dynamics Simulation by Shraddha Parate, Shailima Rampogu, Gihwan Lee, Jong Chan Hong, Keun Woo Lee

“…In the current investigation, the binding of RKIP with C-Raf was explored by knowledge-based protein-protein docking web-servers including HADDOCK and ZDOCK and a consensus binding mode of C-Raf/RKIP structural complex was obtained. …”
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A Hybrid Web Browser Architecture for Mobile Devices by CHO, J., SEO, E., JEONG, J.

“…Since the traffic for the connection establishment and HTTP header fields delivery passes only through the WAN between the proxy and web servers, our approach significantly reduces both the number and size of packets on the mobile network. …”
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Experimental Setup for Investigating the Efficient Load Balancing Algorithms on Virtual Cloud by Bhavya Alankar, Gaurav Sharma, Harleen Kaur, Raul Valverde, Victor Chang

“…In this paper, we have applied the round robin and least connections approach of load balancing to HAProxy, virtual machine clusters and web servers. The experimental results are visualized and summarized using Apache Jmeter and a further comparative study of round robin and least connections is also depicted. …”
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The In Silico Prediction of Hotspot Residues that Contribute to the Structural Stability of Subunit Interfaces of a Picornavirus Capsid by Nicole Upfold, Caroline Ross, Özlem Tastan Bishop, Caroline Knox

“…Using a combination of accessible web servers for hotspot prediction, we performed a comprehensive bioinformatic analysis of the hotspot residues at the intraprotomer, interprotomer and interpentamer interfaces of the Theiler’s murine encephalomyelitis virus (TMEV) capsid. …”
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Prediction of Functional Class of Proteins and Peptides Irrespective of Sequence Homology by Support Vector Machines by Zhi Qun Tang, Hong Huang Lin, Hai Lei Zhang, Lian Yi Han, Xin Chen, Yu Zong Chen

“…The relevant software and web-servers are described. The reported prediction performances in the application of these methods are also presented.…”
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Statistical-Based Mechanism For Detecting Hyper Text Transfer Protocol Ddos Attacks by Ghaben, Ayman Ibrahim Ali

“…This thesis proposes an approach to detect HTTP flooding DDoS attacks on web servers. The proposed approach consists of five phases to achieve the goal of the research, as follows: (1) Data pre-processing, (ii) Aggregated packets attributes aim to aggregate the packets every (t) time based on three attributes which are (a) packet size, (b) regularity (inter arrival time), and (c) number of packets (iii) Anomaly-based detection using four indicators which are : (a) summation rows-columns, (b) Bayes- entropy, (c) skew of the packets distribution, and (d) Reynolds number) (iv) voting- based mechanism, and (v) statistical based mechanism. …”
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An Improved Web Cache Replacement Algorithm Based on Weighting and Cost by Tinghuai Ma, Yu Hao, Wenhai Shen, Yuan Tian, Mznah Al-Rodhaan

“…Cache memory plays an important role in improving the performance of web servers, especially for big data transmission, which response time is constrained. …”
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Trends and challenges in chemoinformatics research in Latin America by Jazmín Miranda-Salas, Carlos Peña-Varas, Ignacio Valenzuela Martínez, Dionisio A. Olmedo, William J. Zamora, Miguel Angel Chávez-Fumagalli, Daniela Q. Azevedo, Rachel Oliveira Castilho, Vinicius G. Maltarollo, David Ramírez, José L. Medina-Franco

“…We team up to provide an author´s perspective on the topics that have been investigated and published over the past twelve years, collaborations between Latin America researchers and others worldwide, contributions to open-access chemoinformatic tools such as web servers, and educational-related resources and events, such as scientific conferences. …”
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Fuzzy Optimization and Normal Simulation for Solving Fuzzy Web Queuing System Problems by Xidong Zheng, Kevin Reilly, James Buckley

“…In this paper, we use both fuzzy optimization and normal simulation methods to solve fuzzy web planning model problems, which are queuing system problems for designing web servers. We apply fuzzy probabilities to the queuing system models with customers arrival rate l and servers?…”
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Auto-Encoder LSTM Methods for Anomaly-Based Web Application Firewallall by Ali Moradi Vartouni, Soheil Mehralian, Mohammad Teshnehlab, Saeed Sedighian Kashi

“…Web Application Firewall (WAF) is known as one of the Intrusion Detection System (IDS) solutions for protecting web servers from HTTP attacks. WAF is a tool to identify and prevent many types of attacks, such as XSS and SQL-injection. …”
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Molecular docking, drug-likeness and DFT study of some modified tetrahydrocurcumins as potential anticancer agents by Ahmed Mahal, Marwan Al-Janabi, Volkan Eyüpoğlu, Anas Alkhouri, Samir Chtita, Mustafa M. Kadhim, Ahmad J. Obaidullah, Jawaher M. Alotaibi, Xiaoyi Wei, Mohammad Rizki Fadhil Pratama

“…Pharmacokinetic and pharmacodynamic (ADME-Tox) analyses were conducted using SwissADME and pKCSM web servers. Total Electron Density (TED) measurements identified molecular adsorption sites, considering various factors, including quantum chemical characteristics, to assess compound effectiveness using DFT method implanted in the Gaussian software. …”
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NPi-Cluster: A Low Power Energy-Proportional Computing Cluster Architecture by Sebastiao Emidio Alves Filho, Aquiles Medeiros Filgueira Burlamaqui, Rafael Vidal Aroca, Luiz Marcos Garcia Goncalves

“…Experimental results show adequate performance of the proposed platform when compared with other web servers running on traditional server architectures, but with considerably less power consumption. …”
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Compound data sets and software tools for chemoinformatics and medicinal chemistry applications: update and data transfer [v1; ref status: indexed, http://f1000r.es/32j] by Ye Hu, Jürgen Bajorath

“…Since publication of this data article, we have generated 13 new data sets with which we further extend our collection of publicly available data and tools. Due to changes in web servers and website architectures, data accessibility has recently been limited at times. …”
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Investigation on the impact of virtualization in cloud data centers by Peng, Bo

“…We measure power consumption, average request delay, throughput, and failed request of the web servers. Our results show that virtual servers can save more power. …”
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Multi-epitope vaccine against cystic echinococcosis using immunodominant epitopes from EgA31 and EgG1Y162 antigens by Hassan Nourmohammadi, Erfan Javanmardi, Morteza Shams, Sadegh Shamsinia, Mohammadreza Chaechi Nosrati, Ali Yousefi, Taher Nemati, Mohammad Fatollahzadeh, Ezatollah Ghasemi, Bahareh Kordi, Hamidreza Majidiani, Hamid Irannejad

“…Then, physico-chemical features, secondary and tertiary structures, refinement and validations were all evaluated using web servers for the multi-epitope vaccine construct. …”
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Technical Evaluation Report 61: The World-Wide Inaccessible Web, Part 2: Internet routes by Jim Klaas, Batchuluun Batpurev, Jon Baggaley

“…The current follow-up study compares these loading times with the complexity of the Internet routes linking the Web users and the Web servers hosting them. The study was conducted in the same 12 Asian countries, with the assistance of members of the International Development Research Centre’s PANdora distance education research network. …”
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