Study of natural ventilation design by integrating the multi-zone model with CFD simulation by Tan, Gang, 1974-

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Information flow control for secure web sites by Krohn, Maxwell N. (Maxwell Norman)

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Phenotype-genotype association grid: a convenient method for summarizing multiple association analyses by Levy, Daniel, DePalma, Steven R., Benjamin, Emelia J., O'Donnell, Christopher J., Parise, Helen, Hirschhorn, Joel N., Vasan, Ramachandran S., Izumo, Seigo, Larson, Martin G.

“…Results: To facilitate visual display and summary of large numbers of association tests of genetic loci with multiple phenotypes, we developed a Phenotype-Genotype Association (PGA) grid display. A database-backed web server was used to create PGA grids from phenotypic and genotypic data (sample sizes, means and standard errors, P-value for association). …”
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Intrusion recovery for database-backed web applications by Chandra, Ramesh, Kim, Taesoo, Shah, Meelap, Narula, Neha, Zeldovich, Nickolai

“…Finally, Warp captures and replays user input at the level of a browser's DOM, to recover from attacks that involve a user's browser. For a web server running MediaWiki, Warp requires no application source code changes to recover from a range of common web application vulnerabilities with minimal user input at a cost of 24--27% in throughput and 2--3.2 GB/day in storage.…”
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LocARNA-P: Accurate boundary prediction and improved detection of structural RNAs by Joshi, T., Hofacker, Ivo L., Stadler, P. F., Backofen, Rolf, Will, Sebastian

“…We provide additional results, a web server for LocARNA/LocARNA-P, and the software package, including documentation and a pipeline for refining screens for structural ncRNA, at http://www.bioinf.uni-freiburg.de/Supplements/LocARNA-P/.…”
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Large scale optimization for resource planning by Ajeet Singh

“…The Flask micro framework platform is used to set the Raspberry PI as a local web server. As a concurrent effort to document the project stages, a complete documentation of the project will be created to serve as a training aids for future use. …”
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Cloud-assisted rendering support for mobile online gaming Part C by Lam, Chun Lih

“…Web servers are deployed using Nginx and video servers is deployed using Node.js. …”
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CoNekT : an open-source framework for comparative genomic and transcriptomic network analyses by Proost, Sebastian, Mutwil, Marek

“…Here, we present CoNekT (Co-expression Network Toolkit), an open source web server, that contains user-friendly tools and interactive visualizations for comparative analyses of gene expression data and co-expression networks. …”
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Development of landslide early wa rning system by online GPS in Central Java, Indonesia by Aditya, Trias, Suharyanto, ., Karnawati, Dwikorita, Fathani, Teuku Faisal

“…The developed system was built using Matlab Web Server for processing GPS data which was supported by some web programming language. …”
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Development of landslide early warning system by online GPS in Central Java, Indonesia by Aditya, Trias, Suharyanto, ., Karnawati, Dwikorita, Fathani, Teuku Faisal

“…The developed system was built using Matlab Web Server for processing GPS data which was supported by some web programming language. …”
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Intuitive content management system via manipulation and duplication with if-else rules classification by Chan, Chung Hoong

“…However, static websites load faster than dynamic ones, since the content is delivered as-is and can be cached by a content delivery network (CDN), and the web server does not need to perform any application logic or database queries. …”
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MP-VHPPI: Meta predictor for viral host protein-protein interaction prediction in multiple hosts and viruses by Muhammad Nabeel Asim, Muhammad Nabeel Asim, Ahtisham Fazeel, Ahtisham Fazeel, Muhammad Ali Ibrahim, Muhammad Ali Ibrahim, Andreas Dengel, Andreas Dengel, Sheraz Ahmed

“…To facilitate the scientific community, the MP-VHPPI web server is available at https://sds_genetic_analysis.opendfki.de/MP-VHPPI/.…”
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A Bioinformatics Tool for the Prediction of DNA N6-Methyladenine Modifications Based on Feature Fusion and Optimization Protocol by Jianhua Cai, Jianhua Cai, Donghua Wang, Riqing Chen, Yuzhen Niu, Xiucai Ye, Ran Su, Guobao Xiao, Leyi Wei, Leyi Wei

“…Finally, we establish a web-server that implements the proposed method for convenience of researchers' use, which is currently available at http://server.malab.cn/6mAPred-FO.…”
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HGDiscovery: An online tool providing functional and phenotypic information on novel variants of homogentisate 1,2- dioxigenase by Malancha Karmakar, Vittoria Cicaloni, Carlos H.M. Rodrigues, Ottavia Spiga, Annalisa Santucci, David B. Ascher

“…All this information is deployed as a user friendly freely available web server called HGDiscovery (https://biosig.lab.uq.edu.au/hgdiscovery/).…”
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Molecular docking and density functional theory (DFT) studies on the conversion of linoleic acid into fatty acid metabolites by Lactiplantibacillus plantarum 12-3 by Tariq Aziz, Muhammad Naveed, Muhammad Aqib Shabbir, Abid Sarwar, Jasra Naseeb, Zhennai Yang

“…After eliminating plasmid sequences to focus on core genomic information, ANI analysis was performed using the JSpecies Web Server. The results verified L. plantarum 12-3’s categorization as a member of the L. plantarum species, demonstrating good conservation and taxonomic relatedness. …”
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Sequence-based prediction of the intrinsic solubility of peptides containing non-natural amino acids by Marc Oeller, Ryan J. D. Kang, Hannah L. Bolt, Ana L. Gomes dos Santos, Annika Langborg Weinmann, Antonios Nikitidis, Pavol Zlatoidsky, Wu Su, Werngard Czechtizky, Leonardo De Maria, Pietro Sormanni, Michele Vendruscolo

“…This method is available as a web server at https://www-cohsoftware.ch.cam.ac.uk/index.php/camsolptm .…”
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GLORY: Generator of the Structures of Likely Cytochrome P450 Metabolites Based on Predicted Sites of Metabolism by Christina de Bruyn Kops, Conrad Stork, Martin Šícho, Martin Šícho, Nikolay Kochev, Nikolay Kochev, Daniel Svozil, Nina Jeliazkova, Johannes Kirchmair, Johannes Kirchmair, Johannes Kirchmair

“…GLORY is freely available as a web server at https://acm.zbh.uni-hamburg.de/glory/, and the datasets and reaction rules are provided in the Supplementary Material.…”
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Glycogen Phosphorylase: A Drug Target of Amino Alcohols in Echinococcus granulosus, Predicted by a Computer-Aided Method by Congshan Liu, Jianhai Yin, Wei Hu, Wei Hu, Haobing Zhang

“…The drug targets were predicted with the idTarget web server. Corresponding three-dimensional structures of the drug targets were built after sequence BLAST analysis and homology modeling. …”
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Molecular and structural insights of β-boswellic acid and glycyrrhizic acid as potent SARS-CoV-2 Envelope protein inhibitors by Syeda Warisul Fatima, Shahenvaz Alam, Sunil K. Khare

“…Moreover, SARS-CoV-2 E protein's secondary structural insights were deciphered using Swiss Model and ProFunc web server. Results: Glycyrrhizic acid, triterpene glycoside isolated from plants of Glycyrrhiza (licorice) showed interactions with envelope protein at chain A: Arg 61, chain B: Phe 23, chain B: Tyr 57, and chain C: Val 25. β- boswellic acid, an ayurvedic herb (pentacyclic terpenoid are produced by Boswellia) represented direct interactions and indirect binding with chain C. …”
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Antibody Class(es) Predictor for Epitopes (AbCPE): A Multi-Label Classification Algorithm by Kiran Kadam, Noor Peerzada, Rajiv Karbhal, Sangeeta Sawant, Jayaraman Valadi, Urmila Kulkarni-Kale

“…To the best of our knowledge, this is the first multi-label method developed for prediction of antibody class(es) for sequential B-cell epitopes and is expected to bring a paradigm shift in the field of immunoinformatics and immunotherapeutic developments in synthetic biology. The AbCPE web server is available at http://bioinfo.unipune.ac.in/AbCPE/Home.html.…”
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