seq-seq-pan: building a computational pan-genome data structure on whole genome alignment by Christine Jandrasits, Piotr W. Dabrowski, Stephan Fuchs, Bernhard Y. Renard

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Genomic data of an environmental Escherichia coli isolate shows high resemblance to E. coli K-12 reference strain MG1655 by Nicola Holden

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ReprDB and panDB: minimalist databases with maximal microbial representation by Wei Zhou, Nicole Gay, Julia Oh

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NucDiff: in-depth characterization and annotation of differences between two sets of DNA sequences by Ksenia Khelik, Karin Lagesen, Geir Kjetil Sandve, Torbjørn Rognes, Alexander Johan Nederbragt

Subjects: “…Whole-genome alignment…”
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Whole-Genome Alignment: Methods, Challenges, and Future Directions by Bacem Saada, Tianchi Zhang, Estevao Siga, Jing Zhang, Maria Malane Magalhães Muniz

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GET_PANGENES: calling pangenes from plant genome alignments confirms presence-absence variation by Bruno Contreras-Moreira, Shradha Saraf, Guy Naamati, Ana M. Casas, Sandeep S. Amberkar, Paul Flicek, Andrew R. Jones, Sarah Dyer

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CloVR-Comparative: automated, cloud-enabled comparative microbial genome sequence analysis pipeline by Sonia Agrawal, Cesar Arze, Ricky S. Adkins, Jonathan Crabtree, David Riley, Mahesh Vangala, Kevin Galens, Claire M. Fraser, Hervé Tettelin, Owen White, Samuel V. Angiuoli, Anup Mahurkar, W. Florian Fricke

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Primary orthologs from local sequence context by Kun Gao, Jonathan Miller

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