Typing methods based on whole genome sequencing data by Laura Uelze, Josephine Grützke, Maria Borowiak, Jens Andre Hammerl, Katharina Juraschek, Carlus Deneke, Simon H. Tausch, Burkhard Malorny

Subjects: “…Whole genome sequencing…”
Get full text

Whole genome sequencing as the ultimate tool to diagnose tuberculosis by Dick van Soolingen, Rana Jajou, Arnout Mulder, Han de Neeling

Subjects: Get full text

Imputation accuracy to whole-genome sequence in Nellore cattle by Gerardo A. Fernandes Júnior, Roberto Carvalheiro, Henrique N. de Oliveira, Mehdi Sargolzaei, Roy Costilla, Ricardo V. Ventura, Larissa F. S. Fonseca, Haroldo H. R. Neves, Ben J. Hayes, Lucia G. de Albuquerque

“…Conclusions Our results indicate that imputation to whole-genome sequence is feasible in Nellore beef cattle since high imputation accuracies per individual are expected. …”
Get full text

The cost-effectiveness of whole genome sequencing in neurodevelopmental disorders by Hannes Runheim, Maria Pettersson, Anna Hammarsjö, Ann Nordgren, Martin Henriksson, Anna Lindstrand, Lars-Åke Levin, Maria Johansson Soller

“…Abstract Whole genome sequencing (WGS) has the potential to be a comprehensive genetic test, especially relevant for individuals with neurodevelopmental disorders, syndromes and congenital malformations. …”
Get full text

Whole-genome sequencing of Aspergillus terreus species complex by Palanivel, Mathangi, Aogáin, Micheál Mac, Purbojati, Rikky Wenang, Uchida, Akira, Aung, Ngu War, Lim, Serene Boon Yuean, Putra, Alexander, Drautz-Moses, Daniela Isabel, Seaton, Shila, Rogers, Thomas R., Schuster, Stephan Christoph, Chotirmall, Sanjay Haresh

“…Currently, an understanding of A. terreus pathogenicity is impeded by a limited number of whole-genome sequences of this fungal pathogen. We here describe a high-quality whole-genome assembly of European A. terreus clinical isolate M6925, derived by single-molecule real-time sequencing with short-read polishing.…”
Get full text

Whole Genome Sequencing in Twins Discordant for 27 Diseases by Ebers, G, Ramagopalan, S

The implementation of whole-genome sequencing for Mycobacterium tuberculosis in Vietnam by Huong, DT, Walker, TM, Ha, DT, Crook, DW, Thwaites, GE, Thuong, NTT

Haemophilus influence: the impact of whole genome sequencing on microbiology. by Tang, C, Hood, D, Moxon, E

Diagnostic value of exome and whole genome sequencing in craniosynostosis by Miller, K, Twigg, S, McGowan, S, Phipps, J, Fenwick, A, Johnson, D, Wall, S, Noons, P, Rees, K, Tidey, E, Craft, J, Taylor, J, Taylor, J, Goos, J, Swagemakers, S, Mathijssen, I, van der Spek, P, Lord, H, Lester, T, Abid, N, Cilliers, D, Hurst, J, Morton, J, Sweeney, E, Weber, A, Wilson, L, Wilkie, A

“…</strong> We utilised exome or whole genome sequencing to seek a genetic cause in a cohort of 40 subjects with craniosynostosis, selected by clinical or molecular geneticists as being high priority cases, and in whom prior clinically-driven genetic testing had been negative. …”

Plantagora: modeling whole genome sequencing and assembly of plant genomes. by Roger Barthelson, Adam J McFarlin, Steven D Rounsley, Sarah Young

“…BACKGROUND: Genomics studies are being revolutionized by the next generation sequencing technologies, which have made whole genome sequencing much more accessible to the average researcher. …”
Get full text

Detection of pericentric inversion with breakpoint in DMD by whole genome sequencing by Ann‐Kathrin Zaum, Indrajit Nanda, Wolfram Kress, Simone Rost

Subjects: Get full text

Whole genome sequence and diversity in multigene families of Babesia ovis by Junya Yamagishi, Junya Yamagishi, Onur Ceylan, Xuenan Xuan, Ferda Sevinc

Get full text

Whole Genome Sequencing in the Management of Non-Tuberculous Mycobacterial Infections by Matúš Dohál, Igor Porvazník, Ivan Solovič, Juraj Mokrý

Subjects: “…whole-genome sequencing…”
Get full text

An Amplicon-Based Approach for the Whole-Genome Sequencing of Human Metapneumovirus by Rachel L. Tulloch, Jen Kok, Ian Carter, Dominic E. Dwyer, John-Sebastian Eden

Subjects: Get full text

Confirmation of fifth Candida auris clade by whole genome sequencing by Bram Spruijtenburg, Hamid Badali, Mahdi Abastabar, Hossein Mirhendi, Sadegh Khodavaisy, Joobin Sharifisooraki, Mojtaba Taghizadeh Armaki, Theun de Groot, Jacques F. Meis

Subjects: Get full text

Validation of whole genome sequencing from dried blood spots by Pooja Agrawal, Shanmukh Katragadda, Arun K. Hariharan, Vijayashree Gauribidanur Raghavendrachar, Arunika Agarwal, Rashmi Dayalu, Disha Awasthy, Sanjay C. Sharma, Yasodha Kannan Sivasamy, P. Lakshmana, Ashwini Shanmugam, Vamsi Veeramachaneni, Vaijayanti Gupta, B. P. Vani, Lekha Subaiya, T. S. Syamala, Ramesh Hariharan, Vijay Chandru, David E. Bloom

Subjects: Get full text

Apple whole genome sequences: recent advances and new prospects by Cameron P. Peace, Luca Bianco, Michela Troggio, Eric van de Weg, Nicholas P. Howard, Amandine Cornille, Charles-Eric Durel, Sean Myles, Zoë Migicovsky, Robert J. Schaffer, Evelyne Costes, Gennaro Fazio, Hisayo Yamane, Steve van Nocker, Chris Gottschalk, Fabrizio Costa, David Chagné, Xinzhong Zhang, Andrea Patocchi, Susan E. Gardiner, Craig Hardner, Satish Kumar, Francois Laurens, Etienne Bucher, Dorrie Main, Sook Jung, Stijn Vanderzande

“…In this review, Cameron Peace at Washington State University in Pullman, US, and colleagues describe the impact whole genome sequencing of the Golden Delicious apple has had on our understanding of how cultivated apples evolved, and the genomic regions controlling fruit firmness and flavor, tree growth dynamics, responses to water and nutrient availability, and other such traits. …”
Get full text

Selection signatures of Fuzhong Buffalo based on whole-genome sequences by Ting Sun, Guang-yun Huang, Zi-hao Wang, Shao-hua Teng, Yan-hong Cao, Jun-li Sun, Quratulain Hanif, Ning-bo Chen, Chu-zhao Lei, Yu-ying Liao

Get full text

Whole genome sequencing of simmental cattle for SNP and CNV discovery by Ting Sun, Shengwei Pei, Yangkai Liu, Quratulain Hanif, Haiyue Xu, Ningbo Chen, Chuzhao Lei, Xiangpeng Yue

Get full text

Phylogenetics and differentiation of Salmonella Newport lineages by whole genome sequencing. by Guojie Cao, Jianghong Meng, Errol Strain, Robert Stones, James Pettengill, Shaohua Zhao, Patrick McDermott, Eric Brown, Marc Allard

“…Our findings demonstrated that analysis using whole genome sequencing data resulted in a more accurate picture of phylogeny compared to that using single genes or small sets of genes. …”
Get full text