Minian, an open-source miniscope analysis pipeline by Zhe Dong, William Mau, Yu Feng, Zachary T Pennington, Lingxuan Chen, Yosif Zaki, Kanaka Rajan, Tristan Shuman, Daniel Aharoni, Denise J Cai

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Bayesian Survival Analysis Model for Girth Weld Failure Prediction by Qingshan Feng, Shengyi Sha, Lianshuang Dai

Subjects: “…survival analysis, pipeline, girth weld, prediction…”
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Impact of concurrency on the performance of a whole exome sequencing pipeline by Daniele Dall’Olio, Nico Curti, Eugenio Fonzi, Claudia Sala, Daniel Remondini, Gastone Castellani, Enrico Giampieri

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MetaPro: a scalable and reproducible data processing and analysis pipeline for metatranscriptomic investigation of microbial communities by Billy Taj, Mobolaji Adeolu, Xuejian Xiong, Jordan Ang, Nirvana Nursimulu, John Parkinson

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A bioinformatics workflow for detecting signatures of selection in genomic data by Murray eCadzow, Murray eCadzow, James eBoocock, James eBoocock, Hoang T Nguyen, Hoang T Nguyen, Phillip eWilcox, Phillip eWilcox, Tony R Merriman, Tony R Merriman, Michael A Black, Michael A Black

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Accurate Digitization of the Chlorophyll Distribution of Individual Rice Leaves Using Hyperspectral Imaging and an Integrated Image Analysis Pipeline by Hui Feng, Hui Feng, Guoxing Chen, Lizhong Xiong, Qian Liu, Wanneng Yang

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Group Analysis in FieldTrip of Time-Frequency Responses: A Pipeline for Reproducibility at Every Step of Processing, Going From Individual Sensor Space Representations to an Across... by Lau M. Andersen

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Blanket antimicrobial resistance gene database with structural information, BOARDS, provides insights on historical landscape of resistance prevalence and effects of mutations in e... by Seyoung Ko, Jaehyung Kim, Jaewon Lim, Sang-Mok Lee, Joon Young Park, Jihoon Woo, Zoe K. Scott-Nevros, Jong R. Kim, Hyunjin Yoon, Donghyuk Kim

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Bioinformatics services for analyzing massive genomic datasets by Gunhwan Ko, Pan-Gyu Kim, Youngbum Cho, Seongmun Jeong, Jae-Yoon Kim, Kyoung Hyoun Kim, Ho-Yeon Lee, Jiyeon Han, Namhee Yu, Seokjin Ham, Insoon Jang, Byunghee Kang, Sunguk Shin, Lian Kim, Seung-Won Lee, Dougu Nam, Jihyun F. Kim, Namshin Kim, Seon-Young Kim, Sanghyuk Lee, Tae-Young Roh, Byungwook Lee

Subjects: “…analysis pipeline…”
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Developing image analysis pipelines of whole-slide images: Pre- and post-processing by Byron Smith, Meyke Hermsen, Elizabeth Lesser, Deepak Ravichandar, Walter Kremers

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CytoPipeline and CytoPipelineGUI: a Bioconductor R package suite for building and visualizing automated pre-processing pipelines for flow cytometry data by Philippe Hauchamps, Babak Bayat, Simon Delandre, Mehdi Hamrouni, Marie Toussaint, Stephane Temmerman, Dan Lin, Laurent Gatto

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TMBcalc: a computational pipeline for identifying pan-cancer Tumor Mutational Burden gene signatures by Grete Francesca Privitera, Salvatore Alaimo, Anna Caruso, Alfredo Ferro, Stefano Forte, Alfredo Pulvirenti

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Machine Learning Approaches for Epidemiological Investigations of Food-Borne Disease Outbreaks by Baiba Vilne, Baiba Vilne, Irēna Meistere, Lelde Grantiņa-Ieviņa, Juris Ķibilds

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UTAP: User-friendly Transcriptome Analysis Pipeline by Refael Kohen, Jonathan Barlev, Gil Hornung, Gil Stelzer, Ester Feldmesser, Kiril Kogan, Marilyn Safran, Dena Leshkowitz

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Current best practices in single‐cell RNA‐seq analysis: a tutorial by Malte D Luecken, Fabian J Theis

Subjects: “…analysis pipeline development…”
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AmpliconDesign – an interactive web server for the design of high-throughput targeted DNA methylation assays by Maximilian Schönung, Jana Hess, Pascal Bawidamann, Sina Stäble, Joschka Hey, Jens Langstein, Yassen Assenov, Dieter Weichenhan, Pavlo Lutsik, Daniel B. Lipka

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PiQSARS: A pipeline for quantitative and statistical analyses of ratiometric fluorescent biosensors by Elise Lévy, Florence Jaffrézic, Denis Laloë, Human Rezaei, Meng-Er Huang, Vincent Béringue, Davy Martin, Laurence Vernis

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ChEAP: ChIP-exo analysis pipeline and the investigation of Escherichia coli RpoN protein-DNA interactions by Ina Bang, Linh Khanh Nong, Joon Young Park, Hoa Thi Le, Sang- Mok Lee, Donghyuk Kim

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A novel approach toward optimal workflow selection for DNA methylation biomarker discovery by Naghme Nazer, Mohammad Hossein Sepehri, Hoda Mohammadzade, Mahya Mehrmohamadi

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Group Analysis in MNE-Python of Evoked Responses from a Tactile Stimulation Paradigm: A Pipeline for Reproducibility at Every Step of Processing, Going from Individual Sensor Space... by Lau M. Andersen

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