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5721
The AP2 Transcription Factor <i>BrSHINE3</i> Regulates Wax Accumulation in Nonheading Chinese Cabbage
Published 2022-11-01“…The analysis of the subcellular localization showed that <i>BrSHINE3</i> is mainly located in the nucleus and chloroplast of tobacco leaves, suggesting that the gene may function as a transcription factor. …”
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5722
<i>Fusarium graminearum</i> Infection Strategy in Wheat Involves a Highly Conserved Genetic Program That Controls the Expression of a Core Effectome
Published 2022-02-01“…Several wheat compartments were predicted to be targeted by these putative effectors including apoplast, nucleus, chloroplast and mitochondria. Taken together, our results shed light on a highly conserved parasite strategy. …”
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5723
Global analysis of lysine 2-hydroxyisobutyrylation during Fusarium graminearum infection in maize
Published 2022-09-01“…Subcellular localization results showed that these Khib modified proteins were localized in cytoplasm, chloroplast, and nucleus. Then, comparative proteomic analysis of the defense response to F. graminearum infection showed that Khib modification participated in plant resistance to pathogen infection by regulating glycolysis, TCA cycle, protein synthesis, peroxisome, and secondary metabolic processes, such as benzoxazinoid biosynthesis, phenylpropanoid biosynthesis, jasmonic acid synthesis, and tyrosine and tryptophan biosynthesis. …”
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5724
Gene co-expression analysis of tomato seed maturation reveals tissue-specific regulatory networks and hubs associated with the acquisition of desiccation tolerance and seed vigour
Published 2021-03-01“…The common module was enriched with genes associated with mRNA processing in chloroplast and mitochondria (including penta- and tetratricopeptide repeat-containing proteins) and post-transcriptional regulation, as well several flowering genes. …”
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5725
Aluminum phytotoxicity induced structural and ultrastructural changes in submerged plant Vallisneria natans
Published 2023-01-01“…Scanning/Transmission electron microscopy analysis displayed the Al-mediated disruption of vascular bundle structure in leaf cells, intercellular space and several vegetative tissues, and demonstrated that Al in vacuole and chloroplast subcellular segregation into electron dense deposition. …”
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5726
Genome-Wide Analysis of the <i>GLK</i> Gene Family and Its Expression at Different Leaf Ages in the <i>Citrus</i> Cultivar Kanpei
Published 2024-03-01“…The <i>GLK</i> gene family plays a crucial role in the regulation of chloroplast development and participates in chlorophyll synthesis. …”
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5727
Proteomics Evidence of a Systemic Response to Desiccation in the Resurrection Plant <i>Haberlea rhodopensis</i>
Published 2022-07-01“…We also found a constitutively abundant dehydrin in <i>H. rhodopensis</i> whose phosphorylation levels increased under stress in the chloroplast fraction. This integrative multi-omics analysis revealed a systemic response to desiccation in <i>H. rhodopensis</i> and certain targets for further genomic and evolutionary studies on DT mechanisms and genetic engineering towards the improvement of drought tolerance in crops.…”
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5728
Analysis of Genetic Diversity and Phylogenetic Relationships of Wheat (<i>Triticum aestivum</i> L.) Genotypes Using Phenological, Molecular and DNA Barcoding Markers
Published 2022-12-01“…Moreover, based on the two chloroplast DNA regions (<i>rbcL</i> and <i>matK</i>), <i>MatK</i> was found to be more reliable for differentiating among <i>T. aestivum</i> genotypes. …”
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5729
Transcriptome Analysis Reveals Changes in Whole Gene Expression, Biological Process, and Molecular Functions Induced by Nickel in Jack Pine (<i>Pinus banksiana</i>)
Published 2023-08-01“…Of these genes, 21.7% were found in the plasma membrane, 16.1% in the cytosol, 12.4% with the chloroplast and 11.9% in the extracellular region. Nickel ions induced changes in gene expression, resulting in the emergence of differentially regulated categories. …”
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5730
Purple stem Brassica napus exhibits higher photosynthetic efficiency, antioxidant potential and anthocyanin biosynthesis related genes expression against drought stress
Published 2022-07-01“…Under drought conditions, the GS genotype showed apparent damages on chloroplast deformation like in thylakoid membrane and grana structural distortion and fewer starch grains and bigger plastoglobuli. …”
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5731
Taxonomy, comparative genomics of Mullein (Verbascum, Scrophulariaceae), with implications for the evolution of Verbascum and Lamiales
Published 2022-08-01“…Several researchers have already worked on the phylogenetic and taxonomic analysis of Verbascum by using ITS data and chloroplast genome fragments and have produced different conclusions. …”
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5732
Genome-Wide Identification and Expression Analysis of Heat Shock Protein 70 (<i>HSP70</i>) Gene Family in Pumpkin (<i>Cucurbita moschata</i>) Rootstock under Drought Stress Suggest...
Published 2022-02-01“…These genes were mostly localized in the cytoplasm, chloroplast, mitochondria, nucleus, and endoplasmic reticulum (ER). …”
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5733
<i>Arabidopsis thaliana</i> Response to Extracellular DNA: Self Versus Nonself Exposure
Published 2021-08-01“…Specifically, exposure to self-DNA limits cell permeability, affecting chloroplast functioning and reactive oxygen species (ROS) production, eventually causing cell cycle arrest, consistently with macroscopic observations of root apex necrosis, increased root hair density and leaf chlorosis. …”
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5734
Recent Trends in Research on the Genetic Diversity of Plants: Implications for Conservation
Published 2019-04-01“…In plants, indices of genetic diversity (e.g., <i>k</i>, <i>h</i> and <i>π</i>) and structure (e.g., F<sub>ST</sub>) are typically inferred from sequences of chloroplast markers. Given the recent advances and popularization of molecular techniques for research in population genetics, phylogenetics, phylogeography, and ecology, we adopted a scientometric approach to compile evidence on the recent trends in the use of cpDNA sequences as markers for the analysis of genetic diversity in botanical studies, over the years. …”
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5735
Effects of rearing system and antibiotic treatment on immune function, gut microbiota and metabolites of broiler chickens
Published 2022-12-01“…ABX treatment significantly reduced the α diversity of ileal microbiota, with less Chloroplast and Mitochondria. In addition, the levels of acetic acid, isobutyric acid, kynurenic acid and allolithocholic acid in the ileum of ground litter broilers were higher. …”
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5736
Salt-Induced Modulation of Ion Transport and PSII Photoprotection Determine the Salinity Tolerance of Amphidiploid Brassicas
Published 2023-07-01“…The expression of key genes responsible for salt tolerance (<i>NHX1</i> and <i>AVP1</i>, which are nuclear-encoded) and photosynthesis (<i>psbA</i>, <i>psaA</i>, <i>petB</i>, and <i>rbcL</i>, which are chloroplast-encoded) were monitored for their genetic differences underlying stress tolerance. …”
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5737
Cloning and Functional Analysis of Dwarf Gene <i>Mini Plant 1</i> (<i>MNP1</i>) in <i>Medicago truncatula</i>
Published 2020-07-01“…The subcellular localization showed that MNP1 was located in the chloroplast. Further analysis indicated that GA<sub>3</sub> could significantly restore the plant height of <i>mnp1-1</i>, and expression of <i>MNP1</i> in a <i>cps1</i> mutant of <i>Arabidopsis</i> partially rescued its mini-plant phenotype, indicating the conservation function of MNP1 in GA biosynthesis. …”
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5738
High effects of climate oscillations on population diversity and structure of endangered Myricaria laxiflora
Published 2024-02-01“…To study the water level fluctuations and climatic shifts on the genetic diversity and genetic differentiation of the six natural populations, 303 individuals from six populations were analyzed based on one nuclear DNA (ITS) and four chloroplast fragments (trnL-F, psbA-trnH, rps16, and rpl16). …”
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5739
MicroRNA156 (miR156) Negatively Impacts Mg-Protoporphyrin IX (Mg-Proto IX) Biosynthesis and Its Plastid-Nucleus Retrograde Signaling in Apple
Published 2020-05-01“…We previously reported that in apple (<i>Malus domestica</i> Borkh.) seedlings, the expression of microRNA156 (miR156) was significantly low in the adult phase, which was accompanied by high levels of hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>) accumulation in chloroplasts. However, it was unclear whether adult-phase-specific chloroplast H<sub>2</sub>O<sub>2</sub> may induce PNRS and affect miR156 expression, or miR156 triggers adult phase PNRS during the ontogenesis. …”
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5740
IodoTMT-labeled redox proteomics reveals the involvement of oxidative post-translational modification in response to para-hydroxybenzoic acid and hydrogen peroxide stresses in popl...
Published 2023-07-01“…The differentially modified proteins (DMPs) were predicted to be mainly localized in the chloroplast and cytoplasm, with most proteins being enzymes with catalytic activities. …”
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