Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of Myrtaceae by Thais N.C. Vasconcelos, Carol E.B. Proença, Berhaman Ahmad, Daniel S. Aguilar, Reinaldo Aguilar, Bruno S. Amorim, Keron Campbell, Itayguara R. Costa, Plauto S. De-Carvalho, Jair E.Q. Faria, Augusto Giaretta, Pepijn W. Kooij, Duane F. Lima, Fiorella F. Mazine, Brigido Peguero, Gerhard Prenner, Matheus F. Santos, Julia Soewarto, Astrid Wingler, Eve J. Lucas

“…One nuclear (ITS) and seven chloroplast (psbA-trnH, matK, ndhF, trnl-trnF, trnQ-rps16, rpl16 and rpl32-trnL) DNA regions for 115 taxa representing 46 out of the 51 genera in the tribe were accessed and analysed using maximum likelihood and Bayesian inference tools for phylogenetic reconstruction. …”
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Multi-omics strategies uncover the molecular mechanisms of nitrogen, phosphorus and potassium deficiency responses in Brassica napus by Ying Fu, Annaliese S. Mason, Maolin Song, Xiyuan Ni, Lei Liu, Jianghua Shi, Tanliu Wang, Meili Xiao, Yaofeng Zhang, Donghui Fu, Huasheng Yu

“…N and K deficiencies resulted in more severe root development responses than P deficiency, as well as greater chlorophyll content reduction in leaves (associated with disrupted chloroplast structure). Transcriptome and metabolome analyses validated the macronutrient-specific responses, with more pronounced effects of N and P deficiencies on mRNAs, microRNAs (miRNAs), circular RNAs (circRNAs) and metabolites relative to K deficiency. …”
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Effect of Se on Yield and Vegetative Characteristics of Brussels Sprouts in Hydroponics by rozita khademi astaneh, seyed jalal Tabatabaie, Saheb Ali Bolandnazar

“…High contents of selenium reduce plant growth and plant dryness, however in some plants low selenium concentrations improved growth and increase stress resistance by maintenance of chloroplast enzymes. Positive response to the use of selenium were mentioned in lettuce, potato, mustard, crap, darnel, soybean (Glycinemax L), potatoes and green tea leaves. …”
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CGKB: an annotation knowledge base for cowpea (<it>Vigna unguiculata L</it>.) methylation filtered genomic genespace sequences by Spraggins Thomas A, Rushton Paul J, Laudeman Thomas W, Chen Xianfeng, Timko Michael P

“…</p> <p>Conclusion</p> <p>CGKB is an integrated and annotated resource for cowpea GSS with features of homology-based and HMM-based annotations, enzyme and pathway annotations, GO term annotation, toolkits, and a large number of other facilities to perform complex queries. The cowpea GSS, chloroplast sequences, mitochondrial sequences, retroelements, and SSR sequences are available as FASTA formatted files and downloadable at CGKB. …”
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Comprehensive Analysis of bHLH Transcription Factors in <i>Ipomoea aquatica</i> and Its Response to Anthocyanin Biosynthesis by Zheng Liu, Xiaoai Fu, Hao Xu, Yuxin Zhang, Zhidi Shi, Guangzhen Zhou, Wenlong Bao

“…Subcellular localization prediction revealed that most IabHLH proteins were localized in the nucleus, while some were in the chloroplast, extracellular space, and endomembrane system. …”
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Taxonomic and Functional Characteristics of the Gill and Gastrointestinal Microbiota and Its Correlation with Intestinal Metabolites in NEW GIFT Strain of Farmed Adult Nile Tilapia... by Zhenbing Wu, Qianqian Zhang, Yaoyao Lin, Jingwen Hao, Shuyi Wang, Jingyong Zhang, Aihua Li

“…By comparing the mucosa- and digesta-associated microbiota, linear discriminant analysis (LDA) effect size (LEfSe) analysis revealed that <i>Pelomonas</i>, <i>Ralstonia</i><i>pickettii</i>, Comamonadaceae, and <i>Staphylococcus</i> were significantly enriched in the mucosa-associated microbiota, whereas many bacterial taxa were significantly enriched in the digesta-associated microbiota, including Chitinophagaceae, <i>Cetobacterium</i>, <i>Candidatus</i><i>Competibacter</i>, <i>Methyloparacoccus</i>, and chloroplast (LDA score > 3.5). Furthermore, <i>Undibacterium</i>, <i>Escherichia</i>-<i>Shigella</i>, <i>Paeniclostridium</i>, and <i>Cetobacterium</i> were dominant in the intestinal contents and mucosae, whereas <i>Sphingomonas</i><i>aquatilis</i> and <i>Roseomonas</i><i>gilardii</i> were commonly found in the gill and stomach mucosae. …”
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DIVERSIDADE GENÉTICA EM POPULAÇÕES NATURAIS DE ARATICUNZEIRO (Annona crassiflora Mart.) POR MEIO DA ANÁLISE DE SEQÜÊNCIAS DE cpDNA GENETIC DIVERSITY OF NATURAL POPULATIONS OF Annon... by Lázaro José Chaves, Alexandre Siqueira Guedes Coelho, Marlei de Fátima Pereira, Angel José Vieira Blanco

“…&lt;/p&gt; &lt;p class="western"&gt;KEY-WORDS: Genetic diversity; cpDNA; chloroplast DNA.&lt;/p&gt;…”
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Morphological and Molecular Assessment of Durian Germplasm in Malaysia by Santoso, Panca Jarot

“…The objective of this study was to determine the genetic variations of durian germplasm in Malaysia, based on morphological traits and PCR-RFLP on chloroplast DNA and ribosomal DNA regions. For study of genetic variation based on morphological traits, a total of 65 durian accessions, consisting of 60 cultivated clones and five wild species were compared. …”
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Advanced Cell Biology / by Reece, Shelia, author 648683

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Study of Comparative Morphology of Eight Cultivated Genotypes of <i>Olea europaea</i> L by Ghulam Sarwar, Tauseef Anwar, Muhammad Shafique Chaudhary, Moazzam Jamil, Asif Kamal, Abd El-Zaher M. A. Mustafa, Abdullah Ahmed Al-Ghamdi, Fazal Ullah, Wajid Zaman

“…Bari Zaitoon-2 led in leaf length to width ratio (4.058) followed by Bari Zaitoon-1 (3.772) with small lanceolate leaves hardly reaching the value of 4, with the lowest value illustrated by Leccino. The total chloroplast pigments were highest in FS-17 followed by Bari Zaitoon-1 and Bari Zaitoon-2, while the lowest was in Arbequina. …”
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A type-I diacylglycerol acyltransferase modulates triacylglycerol biosynthesis and fatty acid composition in the oleaginous microalga, Nannochloropsis oceanica by Hehong Wei, Ying Shi, Xiaonian Ma, Yufang Pan, Hanhua Hu, Yantao Li, Ming Luo, Henri Gerken, Jin Liu

“…Assisted with green fluorescence protein (GFP) fusion, fluorescence microscopy analysis indicated the localization of NoDGAT1A in the chloroplast endoplasmic reticulum (cER) of N. oceanica. …”
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Comparative genetic structure in pines: evolutionary and conservation consequences Estructura genética comparada en pinos: consecuencias evolutivas y para la conservación by PATRICIA DELGADO, ARGELIA CUENCA, ANA E. ESCALANTE, FRANCISCO MOLINA-FREANER, DANIEL PIÑERO

“…Pines have been the focus of several studies that estimate population genetic parameters using both allozymes and chloroplast single sequence repeats (SSRs). Also, the genus has also been recently studied using molecular systematics so that we now have a more clear understanding of their evolutionary history. …”
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Population Variation and Phylogeography of Cherry Blossom (<i>Prunus conradinae</i>) in China by Jingjing Dong, Xiangui Yi, Xianrong Wang, Meng Li, Xiangzhen Chen, Shucheng Gao, Wenyi Fu, Siyu Qian, Xinglin Zeng, Yingke Yun

“…We combined morphological and molecular evidence (three chloroplast DNA (cpDNA) sequences and one nuclear DNA (nr DNA) sequence) to examine the population of <i>P. conradinae</i> variation and differentiation. …”
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Identification and analysis of differentially expressed trihelix genes in maize (Zea mays) under abiotic stresses by Dongbo Zhao, Fengju Gao, Peiyan Guan, Jiansheng Gao, Zhihui Guo, Jianjun Guo, Huini Cui, Yongjun Li, Guijun Zhang, Zhao Li, Lianghai Guo

“…ZmTHs encoded a total of 16 proteins, all of which were located in the nucleus; however, ZmTH04.1 was also distributed in the chloroplast. The protein length varied from 206 to 725 amino acids; the molecular weight ranged from 22.63 to 76.40 kD; and the theoretical isoelectric point (pI) ranged from 5.24 to 11.2. …”
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Evolutionary relationships, biogeography and morphological characters of Glinus (Molluginaceae), with special emphasis on the genus composition in Sub-Saharan Africa by Alexander P. Sukhorukov, Alexander Sennikov, Marie Claire Veranso-Libalah, Maria Kushunina, Maya V. Nilova, Roger Heath, Alison Heath, Yuri Mazei, Maxim A. Zaika

“…A new molecular phylogeny constructed here using nuclear (ITS) and chloroplast (rbcL, trnK-matK) markers confirmed the monophyly of the genus. …”
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Genome-Wide Association Study to Identify Possible Candidate Genes of Snap Bean Leaf and Pod Color by Burcu Celebioglu, John P. Hart, Timothy Porch, Phillip Griffiths, James R. Myers

“…The pod interior did not exhibit colors produced by anthocyanins or flavonols which allowed the differentiation of potential candidate genes associated with chloroplast and photosynthetic activity compared to the pod exterior where candidate genes related to both flavonoids and photosynthesis affected color. …”
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Assessing the Impact of a Two-Layered Spherical Geometry of Phytoplankton Cells on the Bulk Backscattering Ratio of Marine Particulate Matter by Lucile Duforêt-Gaurier, David Dessailly, William Moutier, Hubert Loisel

“…Phytoplankton cells are modeled by a two-layered spherical geometry representing a chloroplast surrounding the cytoplasm. The <inline-formula> <math display="inline"> <semantics> <mover accent="true"> <msub> <mi>b</mi> <mrow> <mi>b</mi> <mi>p</mi> </mrow> </msub> <mo stretchy="false">&#732;</mo> </mover> </semantics> </math> </inline-formula> values are higher when structural heterogeneity is considered because the contribution of coated spheres to light backscattering is higher than homogeneous spheres. …”
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Molecular authentication of Maytenus sp by PCR-RFLP<br>Autenticação molecular de Maytenus sp por PCR-RFLP by Sandra Sayuri Nakamura, Juliana Silveira do Valle, Ezilda Jacomassi, Giani Andrea Linde, Nelson Barros Colauto

“…This study aimed to distinguish Maytenus sp and Sorocea bonplandii by PCR-RFLP of a chloroplast DNA (cpDNA) intergenic region. Three commercial products of processed tea leaves of Maytenus sp, and in natura leaves of Maytenus sp and S. bonplandii were analyzed. …”
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A thaumatin-like genomic sequence identification in Vitis vinifera l., stormy wines and musts based on direct pcr by Jana Žiarovská, Lucia Zeleňáková, Miroslava Kačániová, Eloy Fernández Cusimamani

“…Direct amplification of thaumatin-like protein sequence of <em>Vitis vinifera</em> was performed along with the control reactions with the primers for conserved region of plant chloroplast. Possitive amplification of thaumatin-like allergen sequence resulted in 570 bp amplicon. …”
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Effect of Salt and Drought Stresses and Pretreatment of Salicylic acid on Seed Germination Characteristics of Lavender (Lavandula stricta Del.) by Hadi Sanginabadi, sarah khorasaninejad

“…SA also induces specific changes in leaf anatomy and chloroplast structure. SA is involved in endogenous signaling, mediating in plant defense against pathogens. …”
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