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1641
Complete mitochondrial genome of Anser albifrons frontails (Anseriformes: Anatidae)
Published 2018-07-01“…All PCGs start with ATG and the termination codon TAA is commonly observed. The CR is located between tRNAGlu and tRNAPhe. …”
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1642
Highly expressed proteins have an increased frequency of alanine in the second amino acid position
Published 2006-02-01“…In addition to the detailed analysis of the nucleotide and codon frequencies we compared the N-termini of highly expressed proteins to the N-termini of all proteins coded in the genome.…”
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1643
Molecular Pathology of Human Prion Diseases
Published 2009-03-01“…Mutations of the prion protein gene are associated with genetic forms. The codon 129 polymorphism in combination with the Western blot pattern of PrP after proteinase K digestion serves as a basis for molecular subtyping of sporadic Creutzfeldt-Jakob disease. …”
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1644
The complete mitochdrial genome of Issoria eugenia (Lepidoptera: Nymphalidae: Heliconiinae)
Published 2019-01-01“…All protein-coding genes (PCGs) started with ATN, except for COI gene with CGA, nine PCGs harbour the typical stop codon TAA, whereas four PCGs terminate with TA or T. …”
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1645
Characterization of the complete mitochondrial genome of Loxocephala perpunctata (Hemiptera: Eurybrachidae)
Published 2022-06-01“…All protein-coding genes have the usual ATN start codons, except for ND5, which uses the noncanonical codon GTG. 22 tRNAs, the length ranging from 59 to 69 bp, having the clover-leaf structure except for the dihydrouridine (DHU) arm of trnS2 forming a simple loop.…”
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1646
The mitochondrial genome of Nothybus sumatranus (Diptera: Nothybidae)
Published 2021-04-01“…Genome organization, nucleotide composition and codon usage of the mitogenome are noted, and secondary structures of all tRNAs are predicted. …”
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1647
The complete mitochondrial genome of Helophilus virgatus (Diptera: Syrphidae: Eristalinae) with a phylogenetic analysis of Syrphidae
Published 2019-07-01“…ATN was used as start codon in most of PCGs except for ND1 and COX1, which used TTG. …”
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1648
The complete mitochondrial genome of the giant casemaker caddisfly Phryganea cinerea (Insecta: Trichoptera: Phryganeidae)
Published 2018-01-01“…Phryganea cinerea COX1 features an atypical CGA start codon and COX1, NAD1, NAD4, and NAD5 exhibit incomplete stop codons completed by the addition of 3′ A residues to the mRNA. …”
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1649
Complete mitochondrial genome sequence of Myrmecophaga tridactyla from Brazilian Savanna
Published 2018-07-01“…Ten of the 13 PCGs contained an ATG start codon.…”
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1650
The complete mitochondrial genome of Bothrogonia qiongana (Hemiptera: Cicadellidae) with phylogenetic analyses
Published 2020-07-01“…All PCGs used TAA or TAG as stop codon except COX2 which is using incomplete single T––. …”
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1651
The complete mitochondrial genome of the Madagascar mother-of-pearl butterfly Salamis anteva (Insecta: Lepidoptera: Nymphalidae)
Published 2019-01-01“…The mitogenome includes a COX1 gene with an atypical CGA start codon and four genes exhibiting incomplete stop codons. …”
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1652
Nonsense-Mediated mRNA Decay, a Finely Regulated Mechanism
Published 2022-01-01“…Nonsense-mediated mRNA decay (NMD) is both a mechanism for rapidly eliminating mRNAs carrying a premature termination codon and a pathway that regulates many genes. This implies that NMD must be subject to regulation in order to allow, under certain physiological conditions, the expression of genes that are normally repressed by NMD. …”
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1653
Characterization of the complete mitochondrial genome of Sogatella kolophon (Hemiptera: Delphacidae)
Published 2021-02-01“…All PCGs started with ATN, except for atp6 and nad5, which used noncanonical codon GTG, respectively. All tRNAs could fold into typical clover-leaf secondary structures, with the exception of two trnS genes, lacking the dihydrouridine (DHU) stem.…”
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1654
The complete mitochondrial genome of the Asian river pipefish Doryichthys boaja (Actinopterygii; Syngnathiformes; Syngnathidae) obtained using next-generation sequencing
Published 2018-07-01“…All PCGs were initiated by ATG start codon expecting COX1 by GTG. A phylogenetic tree showed that Doryichthys boaja clustered with Microphis brachyurus.…”
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1655
The mitochondrial genome of Cofana yasumatsui (Hemiptera: Cicadellidae: Cicadellinae)
Published 2020-01-01“…All PCGs used TAN as stop codon, except ND5 stopping with single T. The phylogenetic relationship of C. yasumatsui clustered together with Cicadella viridis, Homalodisca coagulata, Homalodisca vitripennis, and Bothrogonia ferruginea from Cicadellinae. …”
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1656
The Origin of Translation: Bridging the Nucleotides and Peptides
Published 2022-12-01“…Nucleotides are translated into amino acids via transfer RNA in the central dogma. tRNA is essential in translation as it connects the codon and the cognate amino acid. To reveal how the translation emerged in the prebiotic context, we start with the structure and dissection of tRNA, followed by the theory and hypothesis of tRNA and amino acid recognition. …”
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1657
Complete mitochondrial genome of Eilema ussiricum (Lepidoptera: Erebidae)
Published 2020-01-01“…Except for cox1 started with CGA, all other PCGs started with the standard ATN codons. All of the PCGs terminated with the stop codon TAA. …”
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1658
Complete mitochondrial genome of cocktail wrasse Pteragogus flagellifer
Published 2019-01-01“…All its mt protein-coding genes begin with an ATG start codon except for CO1, which begins with GTG. The order of the mt genes is largely identical to that of typical vertebrates, although the position of the TMF-regulated nuclear protein (trnP) is unique among known Labridae gene arrangements. …”
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1659
The complete mitochondrial genome of Cosmoscarta dorsimacula
Published 2019-01-01“…The gene organization, nucleotide composition, and codon usage are similar to other Cercopoidea mitogenomes. …”
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1660
The complete mitochondrial genome of Ruspolia yunnana (Orthoptera: Tettigoniidae: Conocephalinae)
Published 2022-09-01“…Most protein-coding genes started with the codon ATN and ended with stop codons TAA. Phylogenetic analyses based on mitogenomes suggested that Ruspolia yunnana and Ruspolia dubia have the closest genetic relationship. …”
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