The Full Model of the pMHC-TCR-CD3 Complex: A Structural and Dynamical Characterization of Bound and Unbound States by Josephine Alba, Marco D’Abramo

“…The pMHC:TCR interaction has been largely studied by means of both experimental and computational models, giving a contribution in understanding the complexity of the TCR triggering. …”
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7th International conference NBP-2021 “Nanobiophysics: fundamental and applied aspects” by V. А. Karachevtsev, M. V. Kosevich, G. I. Dovbeshko

“…The subjects of physical aspects of biomolecular nanosystems, properties of biomolecules on nanoparticles and nanostructured surfaces, nanobiohybrids formation by 1-D or 2-D nanomaterials with bioobjects, theoretical calculations and computer modeling of nanobiosystems, and applied aspects of nanobiophysics were highlighted at the related sessions. …”
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Finite element analysis of drilling unidirectional CFRP in different ply orientation by H. Sanusi, M.S. Hussin, A.R. Yuzairi, L.H. Peng, M.F.A. Ahmad

“…The results proved that the relationship of thrust force is directly proportional to the feed rate with the difference of computational model are 8 % higher than the experiment. …”
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Computer Technologies of 3D Modeling by Combustion Processes to Create Effective Methods of Burning Solid Fuel and Reduce Harmful Dust and Gas Emissions into the Atmosphere by Aliya Askarova, Saltanat Bolegenova, Valeriy Maximov, Symbat Bolegenova, Nariman Askarov, Aizhan Nugymanova

“…Various regimes of supplying additional air into the combustion space, the volume of which varied from 0% (traditional basic version) to 30% of the total volume of air required for fuel combustion, have been investigated using 3D computer modeling methods. The performed computational experiments made it possible to obtain the distributions of the total velocity vector, temperature fields, concentration fields of carbon monoxide CO and nitrogen dioxide NO₂ over the entire volume of the furnace and at the outlet from it. …”
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Computational analysis of memory consolidation following inhibitory avoidance (IA) training in adult and infant rats: Critical roles of CaMKIIα and MeCP2. by Yili Zhang, Paul Smolen, Cristina M Alberini, Douglas A Baxter, John H Byrne

“…We investigated the ways in which these pathways may contribute to developmental and dynamical features of consolidation. A computational model of molecular processes underlying consolidation following inhibitory avoidance (IA) training in rats was developed. …”
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Refining the Eikonal Model to Reproduce the Influence of Atrial Tissue Geometry on Conduction Velocity by Skupien Nils, Barrios Espinosa Cristian, Dössel Olaf, Loewe Axel

“…In conclusion, a successful step towards a more accurate and fast computational model of cardiac electrophysiology was achieved.…”
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Recognition-based judgments and decisions: What we have learned (so far) by Julian N. Marewski, Rüdiger F. Pohl, Oliver Vitouch, Julian N. Marewski, Rüdiger F. Pohl, Oliver Vitouch

“…Future research on recognition-based inferences should (i) converge on overcoming past controversies, taking an integrative approach to theory building, and considering theories and findings from neighboring fields (such as marketing science and artificial intelligence), (ii) build detailed computational process models of decision strategies, grounded in cognitive architectures, (iii) test existing models of such strategies competitively, (iv) design computational models of the mechanisms of strategy selection, and (v) effectively extend its scope to decision making in the wild, outside controlled laboratory situations.…”
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Recent development of machine learning-based methods for the prediction of defensin family and subfamily by Phasit Charoenkwan, Nalini Schaduangrat, S. M. Hasan Mahmud, Orawit Thinnukool, Watshara Shoombuatong

“…Therefore, summarizing the advantages and disadvantages of the existing methods is urgently needed in order to provide useful suggestions for the development and improvement of new computational models for the identification of the defensin peptide family and subfamily. …”
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Signaling flux redistribution at toll-like receptor pathway junctions. by Kumar Selvarajoo, Yasunari Takada, Jin Gohda, Mohamed Helmy, Shizuo Akira, Masaru Tomita, Masa Tsuchiya, Jun-Ichiro Inoue, Koichi Matsuo

“…We predict, using a computational model built on the perturbation-response approach and the law of mass conservation, that removal and addition of MyD88 in TLR4 activation, enhances and impairs, respectively, the alternative TRAM-dependent pathway through signaling flux redistribution (SFR) at pathway branches. …”
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A Systolic Accelerator for Neuromorphic Visual Recognition by Shuo Tian, Lei Wang, Shi Xu, Shasha Guo, Zhijie Yang, Jianfeng Zhang, Weixia Xu

“…Advances in neuroscience have encouraged researchers to focus on developing computational models that behave like the human brain. HMAX is one of the potential biologically inspired models that mimic the primate visual cortex’s functions and structures. …”
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Myofibroblast senescence promotes arrhythmogenic remodeling in the aged infarcted rabbit heart by Brett C Baggett, Kevin R Murphy, Elif Sengun, Eric Mi, Yueming Cao, Nilufer N Turan, Yichun Lu, Lorraine Schofield, Tae Yun Kim, Anatoli Y Kabakov, Peter Bronk, Zhilin Qu, Patrizia Camelliti, Patrycja Dubielecka, Dmitry Terentyev, Federica del Monte, Bum-Rak Choi, John Sedivy, Gideon Koren

“…Senescent IBZ myofibroblasts in aged rabbits appear to be coupled to myocytes, and our computational modeling showed that senescent myofibroblast-cardiomyocyte coupling prolongs action potential duration (APD) and facilitates conduction block permissive of arrhythmias. …”
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Prediction of miRNA-circRNA Associations Based on k-NN Multi-Label with Random Walk Restart on a Heterogeneous Network by Zengqiang Fang, Xiujuan Lei

“…Second, our proposed KRWRMC is the first computational model to calculate large numbers of miRNA-circRNA associations, which can be regarded as biomarkers to diagnose certain diseases and can thus help us to better understand complicated diseases. …”
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Comparison of Two Models to Estimate Deposition of Fungi and Bacteria in the Human Respiratory Tract by Jessica A. Sagona, Lynn E. Secondo, Gediminas Mainelis

“…Understanding the deposition of bioaerosols in the respiratory system may help determine the risk of disease; however, measuring deposition fraction in-situ is difficult. Computational models provide estimates of particle deposition fraction for given breathing and particle parameters; however, these models traditionally have not focused on bioaerosols. …”
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Effects of tool mediation on tertiary level EFL students’ reading comprehension and vocabulary learning skills: a case for a cloud computing environment by Sisay Ayalew Tsegaw, Abiy Yigzaw Filate, Mulugeta Teka Kahsay

“…AbstractUnderpinned by constructivist learning theory (Feuerstein’s theory of mediated learning experience) and the cloud computing model, an experiment was conducted to examine the differences between the control and experimental groups regarding the linear combinations of tool mediation on students’ reading comprehension and vocabulary learning skills. …”
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Nonlinear mathematical model of an economic soliton by Stanislavovich Oleg

“…The development and use of modern information technologies for enterprise management are based on the introduction of integrated information processing technology and the creation of mathematical methods and computer modeling tools. In the work of information technologies, management is implemented by creating an integrated intelligent computerized system based on the use of economic and mathematical methods, computer technology and communication means, i.e. implements a fundamentally new management platform, which is based on the integration of management information through a mechanism for generalizing the information database and knowledge.…”
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Sensitivity of Model-Based Predictions of Post-TKA Kinematic Behavior to Residual Errors in Ultrasound-Based Knee Collateral Ligament Strain Assessment by Félix Dandois, Orçun Taylan, Jacobus H. Müller, Lennart Scheys

“…We investigated the sensitivity of post-arthroplasty kinematic predictions to ultrasound-based strain estimation errors compared to clinical inaccuracies in implant positioning.Two cadaveric legs were submitted to active squatting, and specimen-specific rigid computer models were formulated. Mechanical properties of the ligament model were optimized to reproduce experimentally obtained tibiofemoral kinematics and loads with minimal error. …”
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Impaired belief updating and devaluation in adult women with bulimia nervosa by Laura A. Berner, Vincenzo G. Fiore, Joanna Y. Chen, Angeline Krueger, Walter H. Kaye, Thalia Viranda, Sanne de Wit

“…Here, we examined whether women with BN show alterations in instrumental learning and devaluation sensitivity using traditional and computational modeling analyses of behavioral data. Adult women with BN (n = 30) and group-matched healthy controls (n = 31) completed a task in which they first learned stimulus-response-outcome associations. …”
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Simulation of stability or failure of a combustion front during in-situ combustion in a Post-SAGD process by Xue Bai, Sihan Wu, Congning Yang, Norman Freitag, Na Jia

“…This accomplishment represents a significant step towards an improved application of the in-situ combustion processes.The simulations were performed with the Computer Modelling Group's (CMG) commercial simulator STARS. …”
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Dynamic Impact of a Rail Vehicle on a Rail Infrastructure with Particular Focus on the Phenomenon of Threshold Effect by Włodzimierz Idczak, Tomasz Lewandrowski, Dominik Pokropski, Tomasz Rudnicki, Jacek Trzmiel

“…Using the analytical and numerical background, the computational model is presented, based on which, it could be possible to determine the impact of the various rail support on the dynamic response of the entire infrastructure. …”
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Performance Analysis of an Integrated Fixed Bed Gasifier Model for Different Biomass Feedstocks by Sharmina Begum, Mohammad G. Rasul, Delwar Akbar, Naveed Ramzan

“…This paper develops an integrated fixed bed gasifier model of biomass gasification using the Advanced System for Process ENngineering (Aspen) Plus software for its performance analysis. A computational model was developed on the basis of Gibbs free energy minimization. …”
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