Context effects on object recognition in real-world environments: A study protocol [version 3; peer review: 1 approved, 2 approved with reservations] by Benjamin Alsbury-Nealy, Victoria I. Nicholls, Alex Clarke, Alexandra Krugliak

“…Second, we will use representational similarity analysis (RSA) and computational models of vision and semantics to determine how visual and semantic processes are changed by congruency. …”
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Reconstructive plastic surgery in patients with complex defects and deformities of the head when removing extracerebral tumors extending beyond the cerebral skull by Tenhiz А. Morozov, Michail S. Kvasha

“…The positive role of reconstructive-plastic operations in complex defects and deformities of the head on the basis of modern possibilities of computer modeling and use of arterial autografts is noted. …”
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Automated machine learning in nanotoxicity assessment: A comparative study of predictive model performance by Xiao Xiao, Tung X. Trinh, Zayakhuu Gerelkhuu, Eunyong Ha, Tae Hyun Yoon

“…Computational modeling has earned significant interest as an alternative to animal testing of toxicity assessment. …”
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GCMM: graph convolution network based on multimodal attention mechanism for drug repurposing by Fan Zhang, Wei Hu, Yirong Liu

“…Although many computational models have been proposed recently, it is still difficult to reliably predict drug–disease associations from a variety of sources of data. …”
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Heteroatoms (B, N, S) doped quantum dots as potential drug delivery system for isoniazid: insight from DFT, NCI, and QTAIM by Henry O. Edet, Hitler Louis, Terkumbur E. Gber, Precious S. Idante, ThankGod C. Egemonye, Providence B. Ashishie, Emmanuella E. Oyo-Ita, Innocent Benjamin, Adedapo S. Adeyinka

“…The said QD has been computationally modeled to assess its effectiveness in delivering isoniazid to desired target. …”
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Design and Verification of Safety Monitoring Device for Emergency Braking of Beijing Subway Capital Airport Line Vehicles by Gongde XU, Ao LIU, Meng GAI, Fayun MA, Feng MIAO, Lei CUI

“…The actual average braking acceleration is around 1.27 m/s2, indicating that the computation model conforms to the actual state of the vehicle emergency braking. …”
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Characterizing the Fused TvG6PD::6PGL Protein from the Protozoan <em>Trichomonas vaginalis</em>, and Effects of the NADP⁺ Molecule on Enzyme Stability by Laura Morales-Luna, Beatriz Hernández-Ochoa, Edson Jiovany Ramírez-Nava, Víctor Martínez-Rosas, Paulina Ortiz-Ramírez, Fabiola Fernández-Rosario, Abigail González-Valdez, Noemí Cárdenas-Rodríguez, Hugo Serrano-Posada, Sara Centeno-Leija, Roberto Arreguin-Espinosa, Miguel Cuevas-Cruz, Daniel Ortega-Cuellar, Verónica Pérez de la Cruz, Luz María Rocha-Ramírez, Edgar Sierra-Palacios, Rosa Angélica Castillo-Rodríguez, Vanesa Vega-García, Yadira Rufino-González, Jaime Marcial-Quino, Saúl Gómez-Manzo

“…In addition, we determined the dissociation constant for the binding (<i>K_d</i>) of NADP⁺ in the protein and suggests the possible structural site in the fused TvG6PD::6PGL protein. Finally, computational modeling studies were performed to obtain an approximation of the structure of TvG6PD::6PGL. …”
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Modeling of active skeletal muscles: a 3D continuum approach incorporating multiple muscle interactions by Wei Zeng, Wei Zeng, Donald R. Hume, Yongtao Lu, Clare K. Fitzpatrick, Colton Babcock, Casey A. Myers, Paul J. Rullkoetter, Kevin B. Shelburne

“…To understand the complex heterogeneous behaviors of muscles, computational modeling has advanced as a non-invasive approach to evaluate relevant mechanical quantities. …”
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Accuracy Characteristics of the Parametric Burg Method for Spatial Signal Processing in a Nonuniform Array Antenna by V. M. Kutuzov, M. A. Ovchinnikov, E. A. Vinogradov

“…Statistical ACs were constructed by computer modelling in the MatLab software, the reliability of which was confirmed by conventional discrete Fourier transform methods, as well as by comparing the obtained ACs with asymptotic bounds, including Cramer-Rao bounds.Results. …”
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Multivariate Analytical Approaches to Identify Key Molecular Properties of Vehicles, Permeants and Membranes That Affect Permeation through Membranes by Omaima N. Najib, Stewart B. Kirton, Gary P. Martin, Michelle J. Botha, Al-Sayed Sallam, Darragh Murnane

“…There has been considerable recent interest in employing computer models to investigate the relationship between the structure of a molecule and its dermal penetration. …”
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Catch the drift: Depressive symptoms track neural response during more efficient decision-making for negative self-referents by Peter J. Castagna, Allison C. Waters, Elizabeth V. Edgar, Rotem Budagzad-Jacobson, Michael J. Crowley

“…Here, we leverage computational modeling of the self-referential encoding task (SRET) to identify behavioral moderators of the association between the posterior late positive potential (LPP), an event-related potential associated with emotion regulation, and youth self-reported symptoms of depression. …”
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Zincbindpredict—Prediction of Zinc Binding Sites in Proteins by Sam M. Ireland, Andrew C. R. Martin

“…Computational means of doing so are faster than spectroscopic means, allowing for searching at much greater speeds and scales, and thereby guiding complimentary experimental approaches. Typically, computational models of zinc binding predict zinc binding for individual residues rather than as a single binding site, and typically do not distinguish between different classes of binding site—missing crucial properties indicative of zinc binding. …”
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Intracellular Na⁺ Modulates Pacemaking Activity in Murine Sinoatrial Node Myocytes: An <i>In Silico</i> Analysis by Stefano Morotti, Haibo Ni, Colin H. Peters, Christian Rickert, Ameneh Asgari-Targhi, Daisuke Sato, Alexey V. Glukhov, Catherine Proenza, Eleonora Grandi

“…<i>Methods</i>: We developed a dataset-specific computational model of the murine SAN myocyte and simulated alterations in the major processes of Na⁺ entry (Na⁺/Ca²⁺ exchanger, NCX) and removal (Na⁺/K⁺ ATPase, NKA). …”
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Step-By-Step Modeling and Demetallation Experimental Study on the Porous Structure in Zeolites by Pavel Kononov, Irina Kononova, Vyacheslav Moshnikov, Evgeniya Maraeva, Olga Trubetskaya

“…We believe that such an approach will be useful for developing ways to create complex zeolite compositions for specific applications, such as catalysis, where the geometry of the pores determines the size of the molecules entering the voids and computer modeling can play an important predictive role. …”
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Defense Strategies for Epidemic Cyber Security Threats: Modeling and Analysis by Using a Machine Learning Approach by Muhammad Sulaiman, Muhammad Waseem, Addisu Negash Ali, Ghaylen Laouini, Fahad Sameer Alshammari

“…This model is a very successful way for cybercrime, bio-mathematics, and artificial intelligence to investigate and comprehend the behaviour of mannerisms with harmful intentions in a computer system. In this computational model, we are studying the factors (i.e., computer viruses, disease infections, and cyberattacks) that affect connected devices. …”
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In silico structure-based designers of therapeutic targets for diabetes mellitus or obesity: A protocol for systematic review. by Ana Francisca Teixeira Gomes, Wendjilla Fortunato de Medeiros, Gerciane Silva de Oliveira, Isaiane Medeiros, Juliana Kelly da Silva Maia, Ingrid Wilza Leal Bezerra, Grasiela Piuvezam, Ana Heloneida de Araújo Morais

“…Obesity is a significant risk factor for several chronic non-communicable diseases, being closely related to Diabetes Mellitus. Computer modeling techniques favor the understanding of interaction mechanisms between specific targets and substances of interest, optimizing drug development. …”
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Thermal Conductivity of Ti-6Al-4V in Laser Powder Bed Fusion by Katharina Bartsch, Bastian Bossen, Waqar Chaudhary, Michael Landry, Dirk Herzog

“…For complete assessment of the powder material, because of the many uncertainties due to the particle size distribution and powder application, a computational model following the network modeling approach is created. …”
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Integrative Strategy of Testing Systems for Identification of Endocrine Disruptors Inducing Metabolic Disorders—An Introduction to the OBERON Project by Karine Audouze, Denis Sarigiannis, Paloma Alonso-Magdalena, Celine Brochot, Maribel Casas, Martine Vrijheid, Patrick J. Babin, Spyros Karakitsios, Xavier Coumoul, Robert Barouki

“…OBERON will combine (1) experimental methods (in vitro, e.g., using 2D and 3D human-derived cells and tissues, and in vivo, i.e., using zebrafish at different stages), (2) high throughput omics technologies, (3) epidemiology and human biomonitoring studies and (4) advanced computational models (in silico and systems biology) on functional endpoints related to metabolism. …”
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Effect of optimized transcranial direct current stimulation on motor cortex activation in patients with sub-acute or chronic stroke: a study protocol for a single-blinded cross-ove... by TaeYeong Kim, Jhosedyn Carolaym Salazar Fajardo, Hanna Jang, Juwon Lee, Yeonkyung Kim, Gowun Kim, Donghyeon Kim

“…Optimizing the electrode location in tDCS for each individual using magnetic resonance imaging (MRI) to generate three-dimensional computer models and calculate the electric field (E-field) induced by tDCS at a specific target point in the primary motor cortex may help reduce these inconsistencies. …”
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An effective drug-disease associations prediction model based on graphic representation learning over multi-biomolecular network by Hanjing Jiang, Yabing Huang

“…Results In this paper, we proposed a novel computation model for DDA predictions based on graph representation learning over multi-biomolecular network (GRLMN). …”
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