KiNext: a portable and scalable workflow for the identification and classification of protein kinases by Elisabeth Hellec, Flavia Nunes, Charlotte Corporeau, Alexandre Cormier

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Best Practices for Comprehensive Annotation of Neuropeptides of <i>Gryllus bimaculatus</i> by Takako Mochizuki, Mika Sakamoto, Yasuhiro Tanizawa, Hitomi Seike, Zhen Zhu, Yi Jun Zhou, Keisuke Fukumura, Shinji Nagata, Yasukazu Nakamura

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Exploring the Genomic Landscape of <i>Bacillus paranthracis</i> PUMB_17 as a Proficient Phosphatidylcholine-Specific Phospholipase C Producer by Vesselin Baev, Ivan Iliev, Yordan Stefanov, Marinela Tsankova, Mariana Marhova, Elena Apostolova, Mariyana Gozmanova, Galina Yahubyan, Sonya Kostadinova

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LiftoffTools: a toolkit for comparing gene annotations mapped between genome assemblies [version 2; peer review: 2 approved] by Alaina Shumate, Steven Salzberg

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Annotating microbial functions with ProkFunFind by Keith Dufault-Thompson, Xiaofang Jiang

Subjects: “…genome annotation…”
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The Apis mellifera Filamentous Virus Genome by Laurent Gauthier, Scott Cornman, Ulrike Hartmann, François Cousserans, Jay D. Evans, Joachim R. de Miranda, Peter Neumann

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OrthoFiller: utilising data from multiple species to improve the completeness of genome annotations by Michael P. Dunne, Steven Kelly

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Comparative Metabolomics of <named-content content-type="genus-species">Mycoplasma bovis</named-content> and <named-content content-type="genus-species">Mycoplasma gallisepticum</n... by Y. Masukagami, D. P. De Souza, S. Dayalan, C. Bowen, S. O’Callaghan, K. Kouremenos, B. Nijagal, D. Tull, K. A. Tivendale, P. F. Markham, M. J. McConville, G. F. Browning, F. M. Sansom

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Genofunc: genome annotation and identification of genome features for automated pipelining analysis of virus whole genome sequences by Xiaoyu Yu

Subjects: “…Genome annotation…”
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Characterization of a Vibrio-infecting bacteriophage, VPMCC5, and proposal of its incorporation as a new genus in the Zobellviridae family by Priyanka Kar, Tridip Kr. Das, Smita Ghosh, Shrabani Pradhan, Sudipta Chakrabarti, Keshab Ch. Mondal, Kuntal Ghosh

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Accelerating de novo SINE annotation in plant and animal genomes by Herui Liao, Yanni Sun, Shujun Ou

Subjects: “…Genome annotation…”
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Draft genome sequences data of Mammaliicoccus lentus isolated from horse farm soil by Pavel Alexyuk, Madina Alexyuk, Yergali Moldakhanov, Vladimir Berezin, Andrey Bogoyavlenskiy

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A reference genome for the eastern bettong (Bettongia gaimardi) [version 2; peer review: 2 approved, 1 approved with reservations] by Richard J Edwards, Luke W Silver, Sam Banks, Carolyn J Hogg, Adrian D. Manning, Linda Neaves

Subjects: “…Genome annotation…”
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Annotation of structural variants with reported allele frequencies and related metrics from multiple datasets using SVAFotate by Thomas J. Nicholas, Michael J. Cormier, Aaron R. Quinlan

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Functional genome Annotation in Bacterial infections: A Review by Sharique Ahmad, Shivani Singh, Shriya Arora, Saurabh Srivastava

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Improved annotation of Lutzomyia longipalpis genome using bioinformatics analysis by Zhiyuan Yang, Ying Wu

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VARUS: sampling complementary RNA reads from the sequence read archive by Mario Stanke, Willy Bruhn, Felix Becker, Katharina J. Hoff

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Archaeal Clusters of Orthologous Genes (arCOGs): An Update and Application for Analysis of Shared Features between Thermococcales, Methanococcales, and Methanobacteriales by Kira S. Makarova, Yuri I. Wolf, Eugene V. Koonin

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A reference genome for the eastern bettong (Bettongia gaimardi) [version 1; peer review: 2 approved] by Richard J Edwards, Luke W Silver, Sam Banks, Carolyn J Hogg, Adrian Manning, Linda Neaves

Subjects: “…Genome annotation…”
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A Long-Read Genome Assembly of a Native Mite in China <i>Pyemotes zhonghuajia</i> Yu, Zhang & He (Prostigmata: Pyemotidae) Reveals Gene Expansion in Toxin-Related Gene Families by Yan-Fei Song, Li-Chen Yu, Mao-Fa Yang, Shuai Ye, Bin Yan, Li-Tao Li, Chen Wu, Jian-Feng Liu

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