On the origin of DNA genomes: evolution of the division of labor between template and catalyst in model replicator systems. by Nobuto Takeuchi, Paulien Hogeweg, Eugene V Koonin

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Developmental constraint shaped genome evolution and erythrocyte loss in Antarctic fishes following paleoclimate change. by Jacob M Daane, Juliette Auvinet, Alicia Stoebenau, Donald Yergeau, Matthew P Harris, H William Detrich

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CoreSimul: a forward-in-time simulator of genome evolution for prokaryotes modeling homologous recombination by Louis-Marie Bobay

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Numt-mediated double-strand break repair mitigates deletions during primate genome evolution. by Einat Hazkani-Covo, Shay Covo

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Evidence for reductive genome evolution and lateral acquisition of virulence functions in two Corynebacterium pseudotuberculosis strains. by Jerônimo C Ruiz, Vívian D'Afonseca, Artur Silva, Amjad Ali, Anne C Pinto, Anderson R Santos, Aryanne A M C Rocha, Débora O Lopes, Fernanda A Dorella, Luis G C Pacheco, Marcília P Costa, Meritxell Z Turk, Núbia Seyffert, Pablo M R O Moraes, Siomar C Soares, Sintia S Almeida, Thiago L P Castro, Vinicius A C Abreu, Eva Trost, Jan Baumbach, Andreas Tauch, Maria Paula C Schneider, John McCulloch, Louise T Cerdeira, Rommel T J Ramos, Adhemar Zerlotini, Anderson Dominitini, Daniela M Resende, Elisângela M Coser, Luciana M Oliveira, André L Pedrosa, Carlos U Vieira, Cláudia T Guimarães, Daniela C Bartholomeu, Diana M Oliveira, Fabrício R Santos, Élida Mara Rabelo, Francisco P Lobo, Glória R Franco, Ana Flávia Costa, Ieso M Castro, Sílvia Regina Costa Dias, Jesus A Ferro, José Miguel Ortega, Luciano V Paiva, Luiz R Goulart, Juliana Franco Almeida, Maria Inês T Ferro, Newton P Carneiro, Paula R K Falcão, Priscila Grynberg, Santuza M R Teixeira, Sérgio Brommonschenkel, Sérgio C Oliveira, Roberto Meyer, Robert J Moore, Anderson Miyoshi, Guilherme C Oliveira, Vasco Azevedo

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Retrotransposons within Syntenic Regions between Soybean and Medicago truncatula and Their Contribution to Local Genome Evolution by Bindu Joseph, Jessica A. Schlueter, Jianchang Du, Michelle A. Graham, Jianxin Ma, Randy C. Shoemaker

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Editorial: Mobile elements and plant genome evolution, comparative analyses and computational tools, volume II by Ruslan Kalendar, Ruslan Kalendar, Gennady I. Karlov

Subjects: “…plant genome evolution…”
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Publisher Correction: DNA-based copy number analysis confirms genomic evolution of PDX models by Anna C. H. Hoge, Michal Getz, Anat Zimmer, Minjeong Ko, Linoy Raz, Rameen Beroukhim, Todd R. Golub, Gavin Ha, Uri Ben-David

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Regulation of Error-Prone DNA Double-Strand Break Repair and Its Impact on Genome Evolution by Terrence Hanscom, Mitch McVey

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A chromosome-level genome of Semiothisa cinerearia provides insights into its genome evolution and control by Shengqi Chi, Yanchun Wang, Zhongkai Wang, Haorong Li, Songdong Gu, Yandong Ren

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The climate changes promoted the chloroplast genomic evolution of Dendrobium orchids among multiple photosynthetic pathways by Qiqian Xue, Jiapeng Yang, Wenhui Yu, Hongman Wang, Zhenyu Hou, Chao Li, Qingyun Xue, Wei Liu, Xiaoyu Ding, Zhitao Niu

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Genomic evolution of porcine reproductive and respiratory syndrome virus (PRRSV) isolates revealed by deep sequencing. by Manreetpal Singh Brar, Mang Shi, Raymond Kin-Hi Hui, Frederick Chi-Ching Leung

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Positive Selection Driving Cytoplasmic Genome Evolution of the Medicinally Important Ginseng Plant Genus Panax by Peng Jiang, Feng-Xue Shi, Ming-Rui Li, Bao Liu, Jun Wen, Hong-Xing Xiao, Lin-Feng Li

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Role of Hfq in Genome Evolution: Instability of G-Quadruplex Sequences in <i>E. coli</i> by Virali J. Parekh, Brittany A. Niccum, Rachna Shah, Marisa A. Rivera, Mark J. Novak, Frederic Geinguenaud, Frank Wien, Véronique Arluison, Richard R. Sinden

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Genomic analyses provide insights into the genome evolution and environmental adaptation of the tobacco moth Ephestia elutella by Jiadan Xu, Bo Li, Zhimin Jiang, Weimin Wang, Yi Yang, Maofa Yang, Maofa Yang, Xinhai Ye, Xinhai Ye

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Loss of genes for DNA recombination and repair in the reductive genome evolution of thioautotrophic symbionts of <it>Calyptogena </it>clams by Maeda Taro, Yoshida Takao, Shimamura Shigeru, Takaki Yoshihiro, Kuwahara Hirokazu, Kunieda Takekazu, Maruyama Tadashi

“…Ruthia magnifica (Rma; <it>C. magnifica </it>symbiont), have small genomes (1.02 and 1.16 Mb, respectively) with low G+C contents (31.6% and 34.0%, respectively) and are thought to be in an ongoing stage of reductive genome evolution (RGE). They lack <it>recA </it>and some genes for DNA repair, including <it>mutY</it>. …”
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The Jujube Genome Provides Insights into Genome Evolution and the Domestication of Sweetness/Acidity Taste in Fruit Trees. by Jian Huang, Chunmei Zhang, Xing Zhao, Zhangjun Fei, KangKang Wan, Zhong Zhang, Xiaoming Pang, Xiao Yin, Yang Bai, Xiaoqing Sun, Lizhi Gao, Ruiqiang Li, Jinbo Zhang, Xingang Li

“…This study provides valuable genomic resources for jujube improvement, and offers insights into jujube genome evolution and its population structure and domestication.…”
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Analysis of structural variants in four African cichlids highlights an association with developmental and immune related genes by Luca Penso-Dolfin, Angela Man, Tarang Mehta, Wilfried Haerty, Federica Di Palma

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Impact of host demography and evolutionary history on endosymbiont molecular evolution: A test in carpenter ants (genus Camponotus) and their Blochmannia endosymbionts by Joseph D. Manthey, Jennifer C. Girón, Jack P. Hruska

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The Structural, Functional and Evolutionary Impact of Transposable Elements in Eukaryotes by Dareen Almojil, Yann Bourgeois, Marcin Falis, Imtiyaz Hariyani, Justin Wilcox, Stéphane Boissinot

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