Genome sequence and genetic diversity of European ash trees by Sollars, E, Harper, A, Kelly, L, Sambles, C, Ramirez-Gonzalez, R, Swarbreck, D, Kaithakottil, G, Cooper, E, Uauy, C, Havlickova, L, Worswick, G, Studholme, D, Zohren, J, Salmon, D, Clavijo, B, Li, Y, He, Z, Fellgett, A, Vig McKinney, L, Nielsen, L, Douglas, G, Kjaer, E, Downie, J, Boshier, D, Lee, S, Clark, J, Grant, M, Bancroft, I, Caccamo, M, Buggs, R

The genome sequence of the spectacle, Abrostola tripartita Hufnagel, 1766 by Boyes, D, Crowley, LM, Holland, PWH

“…We present a genome assembly from an individual male <i>Abrostola tripartita</i> (the spectacle; Arthropoda; Insecta; Lepidoptera; Noctuidae). The genome sequence is 381 megabases in span. The majority of the assembly (99.99%) is scaffolded into 31 chromosomal pseudomolecules, with the Z sex chromosome assembled.…”

Diagnostic value of exome and whole genome sequencing in craniosynostosis by Miller, K, Twigg, S, McGowan, S, Phipps, J, Fenwick, A, Johnson, D, Wall, S, Noons, P, Rees, K, Tidey, E, Craft, J, Taylor, J, Taylor, J, Goos, J, Swagemakers, S, Mathijssen, I, van der Spek, P, Lord, H, Lester, T, Abid, N, Cilliers, D, Hurst, J, Morton, J, Sweeney, E, Weber, A, Wilson, L, Wilkie, A

“…</strong> We utilised exome or whole genome sequencing to seek a genetic cause in a cohort of 40 subjects with craniosynostosis, selected by clinical or molecular geneticists as being high priority cases, and in whom prior clinically-driven genetic testing had been negative. …”

Insights into hominid evolution from the gorilla genome sequence by Scally, A, Dutheil, J, Hillier, L, Jordan, G, Goodhead, I, Herrero, J, Hobolth, A, Lappalainen, T, Mailund, T, Marques-Bonet, T, McCarthy, S, Montgomery, S, Schwalie, P, Tang, Y, Ward, M, Xue, Y, Yngvadottir, B, Alkan, C, Andersen, L, Ayub, Q, Ball, E, Beal, K, Bradley, B, Chen, Y, Clee, C

“…Here we present the assembly and analysis of a genome sequence for the western lowland gorilla, and compare the whole genomes of all extant great ape genera. …”

The genome sequence of the Seraphim, Lobophora halterata (Hufnagel, 1767) by Boyes, D, Holland, PWH

“…We present a genome assembly from an individual female Lobophora halterata (the Seraphim; Arthropoda; Insecta; Lepidoptera; Geometridae). The genome sequence is 315 megabases in span. The complete assembly is scaffolded into 32 chromosomal pseudomolecules with the Z and W sex chromosomes assembled. …”

The genome sequence of the sycamore, Acronicta aceris (Linnaeus, 1758) by Boyes, D, Crowley, LM, Holland, PWH

“…We present a genome assembly from an individual female <i>Acronicta aceris</i> (the sycamore; Arthropoda; Insecta; Lepidoptera; Noctuidae). The genome sequence is 466 megabases in span. The complete assembly is scaffolded into 32 chromosomal pseudomolecules, with the W and Z sex chromosome assembled.…”

Genomic sequencing and analyses of Lymantria xylina multiple nucleopolyhedrovirus. by Nai, Yu Shin, Wu, Chih Yu, Wang, Tai Chuan, Chen, Yun Ru, Lau, Wei Hong, Lo, Chu Fang, Tsai, Meng Feng, Wang, Chung Hsiung

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Mapping copy number variation by population-scale genome sequencing by Handsaker, Robert E.

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Operational streamlining in a high-throughput genome sequencing center by Person, Kerry P. (Kerry Patrick)

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Melanoma genome sequencing reveals frequent PREX2 mutations by Berger, Michael F., Hodis, Eran, Heffernan, Timothy P., Deribe, Yonathan Lissanu, Lawrence, Michael S., Protopopov, Alexei, Ivanova, Elena, Watson, Ian R., Nickerson, Elizabeth, Ghosh, Papia, Zhang, Hailei, Zeid, Rhamy, Ren, Xiaojia, Cibulskis, Kristian, Sivachenko, Andrey Y., Wagle, Nikhil, Sucker, Antje, Sougnez, Carrie, Onofrio, Robert, Lander, Eric Steven

“…PREX2 mutations are biologically relevant, as ectopic expression of mutant PREX2 accelerated tumour formation of immortalized human melanocytes in vivo. Thus, whole-genome sequencing of human melanoma tumours revealed genomic evidence of ultraviolet pathogenesis and discovered a new recurrently mutated gene in melanoma.…”
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Draft genome sequence of Klebsiella pneumoniae strain KP-1 by Rice, Scott A., Lee, Kai Wei Kelvin, Arumugam, Krithika, Purbojati, Rikky Wenang, Tay, Qi Xiang Martin, Williams, Rohan Benjamin Hugh, Kjelleberg, Staffan

“…Klebsiella pneumoniae is ubiquitous in the environment and is a member of a three-species biofilm model. We compared the genome sequence of an environmental isolate, K. pneumoniae strain KP-1, to those of two clinical strains (NTUH-K2044 and MGH 78578). …”
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Complete genome sequence of Thalassotalea euphylliae strain H2 by Summers, Stephen, Freckelton, Marnie L., Nedved, Brian T., Rice, Scott A., Hadfield, Michael G.

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Phylogenetic analysis of allotetraploid species using polarized genomic sequences by Leal, J. Luis, Milesi, Pascal, Salojärvi, Jarkko, Lascoux, Martin

“…This knowledge is harnessed to build a new heuristic algorithm where, by replacing the allopolyploid genomic sequence in the MSA by its polarized version, it is possible to identify the phylogenetic position of the polyploid's ancestral parents in an iterative process. …”
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Draft genome sequence of Shewanella sp. strain CP20 by Lutz, Carla, Sun, Shuyang, McDougald, Diane, Tay, Martin Qi Xiang

“…Here, we report the draft genome sequence of Shewanella sp. CP20 and discuss the potential mechanisms facilitating intraprotozoan survival.…”
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The genome sequence of the Common Emerald, Hemithea aestivaria (Hübner, 1789) by Boyes, D, Holland, PWH

“…We present a genome assembly from an individual male Hemithea aestivaria (the Common Emerald; Arthropoda; Insecta; Lepidoptera; Geometridae). The genome sequence is 501.7 megabases in span. Most of the assembly is scaffolded into 31 chromosomal pseudomolecules, including the Z sex chromosome. …”

The genome sequence of the Leopard Moth, Zeuzera pyrina (Linnaeus, 1761) by Boyes, D, Holland, PWH

“…We present a genome assembly from an individual male Zeuzera pyrina (the Leopard Moth, Arthropoda; Insecta; Lepidoptera; Cossidae). The genome sequence is 687 megabases in span. Most of the assembly is scaffolded into 31 chromosomal pseudomolecules, including the assembled Z sex chromosome. …”

Investigation of in-hospital norovirus transmission using whole genome sequencing by Wong, THN

“…</p> <p>The study explored the application of 'next generation' high throughput DNA sequencing technologies to the determination of large numbers of norovirus genomes. Whole genome sequences provide the highest possible level of discrimination among viruses, information which is essential to the identification of linked and independent cases of infection. …”

The genome sequence of the iron prominent, Notodonta dromedarius (Linnaeus, 1767) by Boyes, D, Holland, PWH

“…We present a genome assembly from an individual male Notodonta dromedarius (iron prominent; Arthropoda; Insecta; Lepidoptera; Notodontidae). The genome sequence is 342 megabases in span. The majority of the assembly, 99.35%, is scaffolded into 31 chromosomal pseudomolecules, with the Z sex chromosome assembled.…”

The genome sequence of the Brindled Green, Dryobotodes eremita (Fabricius, 1775) by Boyes, D, Holland, PWH

“…We present a genome assembly from an individual female <i>Dryobotodes eremita</i> (the Brindled Green; Arthropoda; Insecta; Lepidoptera; Noctuidae). The genome sequence is 709.8 megabases in span. Most of the assembly is scaffolded into 32 chromosomal pseudomolecules including the Z and W sex chromosomes. …”

Application of the Neutral Indel Model to genome sequences for diverse metazoans by Meader, S

“…The Neutral Indel Model is able to predict accurately the distribution of indel events in alignments of neutrally evolving genomic sequence. Here, I apply this model to a diverse range of metazoan species pairs, to a number of ends. …”