Ggtree: A serialized data object for visualization of a phylogenetic tree and annotation data by Shuangbin Xu, Lin Li, Xiao Luo, Meijun Chen, Wenli Tang, Li Zhan, Zehan Dai, Tommy T. Lam, Yi Guan, Guangchuang Yu

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Beyond personal space: Unveiling the transmission pattern of the human gut and oral microbiome by Sergio Andreu‐Sánchez, Jiafei Wu, Jingyuan Fu

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Gut microbiota composition in the sympatric and diet‐sharing Drosophila simulans and Dicranocephalus wallichii bowringi shaped largely by community assembly processes rather than r... by Yu‐Xi Zhu, Run Yang, Xin‐Yu Wang, Tao Wen, Ming‐Hui Gong, Yuan Shen, Jue‐Ye Xu, Dian‐Shu Zhao, Yu‐Zhou Du

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Ontology characterization, enrichment analysis, and similarity calculation‐based evaluation of disease–syndrome–formula associations by applying SoFDA by Yudong Liu, Jia Xu, Zecong Yu, Tong Chen, Ning Wang, Xia Du, Ping Wang, Xuezhong Zhou, Haiyu Xu, Yanqiong Zhang

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Novel microbial modifications of bile acids and their functional implications by Dan Zheng, Huiheng Zhang, Xiaojiao Zheng, Aihua Zhao, Wei Jia

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StrainPanDA: Linked reconstruction of strain composition and gene content profiles via pangenome‐based decomposition of metagenomic data by Han Hu, Yuxiang Tan, Chenhao Li, Junyu Chen, Yan Kou, Zhenjiang Zech Xu, Yang‐Yu Liu, Yan Tan, Lei Dai

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The impact of aquaculture system on the microbiome and gut metabolome of juvenile Chinese softshell turtle (Pelodiscus sinensis) by Xia Ding, Feng Jin, Jiawang Xu, Shulei Zhang, Dongxu Chen, Beijuan Hu, Yijiang Hong

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Probio‐M9, a breast milk‐originated probiotic, alleviates mastitis and enhances antibiotic efficacy: Insights into the gut–mammary axis by Jie Yu, Weicheng Li, Ruibo Xu, Xiaoye Liu, Guangqi Gao, Lai‐Yu Kwok, Yongfu Chen, Zhihong Sun, Wenjun Liu, Heping Zhang

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A comprehensive analysis of antibiotic resistance genes in the giant panda gut by Feilong Deng, Yanhua Han, Yushan Huang, Desheng Li, Jianmin Chai, Linhua Deng, Ming Wei, Kai Wu, HuaBin Zhao, Guan Yang, Jiangchao Zhao, Ying Li, Chengdong Wang

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Host selection tendency of key microbiota in arid desert lichen crusts by Ting‐Ting Zhang, Martin Grube, Xin‐Li Wei

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Gut microbiome and metabolome characteristics of patients with cholesterol gallstones suggest the preventive potential of prebiotics by Ye Liu, Hexin Li, Tianhan Sun, Gaoyuan Sun, Boyue Jiang, Meilan Liu, Qing Wang, Tong Li, Jianfu Cao, Li Zhao, Fei Xiao, Fangqing Zhao, Hongyuan Cui

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The prognostic and therapeutic significance of polyunsaturated fatty acid‐derived oxylipins in ST‐segment elevation myocardial infarction by Zhiyong Du, Yingyuan Lu, Ying Ma, Yunxiao Yang, Wei Luo, Sheng Liu, Ming Zhang, Yong Wang, Lei Li, Chun Li, Wei Wang, Hai Gao

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Glucomannan promotes Bacteroides ovatus to improve intestinal barrier function and ameliorate insulin resistance by Qixing Nie, Yonggan Sun, Wenbing Hu, Chunhua Chen, Qiongni Lin, Shaoping Nie

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Metabolite profiling of human‐originated Lachnospiraceae at the strain level by Rashidin Abdugheni, Wen‐Zhao Wang, Yu‐Jing Wang, Meng‐Xuan Du, Feng‐Lan Liu, Nan Zhou, Cheng‐Ying Jiang, Chang‐Yu Wang, Linhuan Wu, Juncai Ma, Chang Liu, Shuang‐Jiang Liu

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Gut–X axis by Xu Lin, Zuxiang Yu, Yang Liu, Changzhou Li, Hui Hu, Jia‐Chun Hu, Mian Liu, Qin Yang, Peng Gu, Jiaxin Li, Kutty Selva Nandakumar, Gaofei Hu, Qi Zhang, Xinyu Chen, Huihui Ma, Wenye Huang, Gaofeng Wang, Yan Wang, Liping Huang, Wenjuan Wu, Ning‐Ning Liu, Chenhong Zhang, Xingyin Liu, Leming Zheng, Peng Chen

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A universal oral microbiome‐based signature for periodontitis by Mingyan Geng, Min Li, Yun Li, Jiaying Zhu, Chuqing Sun, Yan Wang, Wei‐Hua Chen

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MultiPrime: A reliable and efficient tool for targeted next‐generation sequencing by Han Xia, Zhe Zhang, Chen Luo, Kangfei Wei, Xuming Li, Xiyu Mu, Meilin Duan, Chuanlong Zhu, Luyi Jin, Xiaoqing He, Lingjie Tang, Long Hu, Yuanlin Guan, David C. C. Lam, Junbo Yang

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PHGD: An integrative and user‐friendly database for plant hormone‐related genes by Shuyan Feng, Zhuo Liu, Huilong Chen, Nan Li, Tong Yu, Rong Zhou, Fulei Nie, Di Guo, Xiao Ma, Xiaoming Song

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Deep learning enhancing guide RNA design for CRISPR/Cas12a‐based diagnostics by Baicheng Huang, Ling Guo, Hang Yin, Yue Wu, Zihan Zeng, Sujie Xu, Yufeng Lou, Zhimin Ai, Weiqiang Zhang, Xingchi Kan, Qian Yu, Shimin Du, Chao Li, Lina Wu, Xingxu Huang, Shengqi Wang, Xinjie Wang

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Integrating genome‐ and transcriptome‐wide association studies to uncover the host–microbiome interactions in bovine rumen methanogenesis by Wei Wang, Zhenyu Wei, Zhuohui Li, Jianrong Ren, Yanliang Song, Jingyi Xu, Anguo Liu, Xinmei Li, Manman Li, Huimei Fan, Liangliang Jin, Zhannur Niyazbekova, Wen Wang, Yuanpeng Gao, Yu Jiang, Junhu Yao, Fuyong Li, Shengru Wu, Yu Wang

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