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201
Targeting PD-1/PD-L-1 immune checkpoint inhibition for cancer immunotherapy: success and challenges
Published 2024-04-01“…This article may provide a comprehensive guide to medicinal chemists regarding the potential structural scaffolds required for PD-1/PD-L-1 interaction inhibition.…”
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202
On the prediction of protein-ligand structural complexes and binding affinities by hybrid statistical scoring function
Published 2023“…The strategy of exploiting the pattern of the formation of protein-ligand interactions from experimental measurements and the resemblance to the common scaffolds shared by these ligands, will point the way when medicinal chemists or pharmacologists are confronted with unknown hits compounds or drug targets. …”
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Final Year Project (FYP) -
203
Chemistry and Biochemistry of Oxygen Therapeutics : From Transfusion to Artificial Blood /
Published 2011“…Chemistry and Biochemistry of Oxygen Therapeutics: From Transfusion to Artificial Blood is an essential reference for clinicians, haematologists, medicinal chemists, biochemists, molecular biologists, biotechnologists and blood substitute researchers.…”
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204
Challenging the Drug-Likeness Dogma for New Drug Discovery in Tuberculosis
Published 2018-07-01“…Nevertheless, in the “instruction manual” of medicinal chemists, certain functional groups or certain physicochemical characteristics (i.e., high lipophilicity) are considered red flags to look out for in order to safeguard drug-likeness and avoid attritions in the drug discovery process. …”
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Article -
205
In Silico and In Vitro Investigation of Cytotoxicity and Apoptosis of Acridine/Sulfonamide Hybrids Targeting Topoisomerases I and II
Published 2024-11-01“…Background: Sulfonamide acridine derivatives have garnered significant attention from medicinal chemists due to their diverse range of biological activities. …”
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Article -
206
QSAR, Molecular Docking, MD Simulation and MMGBSA Calculations Approaches to Recognize Concealed Pharmacophoric Features Requisite for the Optimization of ALK Tyrosine Kinase Inhib...
Published 2022-08-01“…As a result, the current study assists medicinal chemists in prioritizing compounds for experimental detection of anticancer activity, as well as their optimization towards more potent ALK tyrosine kinase inhibitor.…”
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Article -
207
Pharmacological inhibition of the methyltransferases SUV4-20 in cellular models of Friedreich’s ataxia
Published 2021“…Working in collaboration with medicinal chemists, we were provided with 22 structural derivatives of A-196, in order to determine their effectiveness to increase FXN expression. …”
Thesis -
208
Navigating into the binding pockets of the HER family protein kinases: discovery of novel EGFR inhibitor as antitumor agent
Published 2015-07-01“…Although so far a number of studies have been reported on the development of third-generation EGFR inhibitors for overcoming the resistance issue, the design procedure largely depends on the intuition of medicinal chemists. Here we retrospectively make a detailed analysis of the 42 EGFR family protein crystal complexes deposited in the Protein Data Bank (PDB). …”
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209
Linearly ring-fused coumarins: A review of their cancer-fighting attributes
Published 2024-06-01“…The reviewed data may help medicinal chemists create and manufacture functionally active leads using the scaffolds that have been mentioned. …”
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Article -
210
End-to-end sequence-structure-function meta-learning predicts genome-wide chemical-protein interactions for dark proteins.
Published 2023-01-01“…Furthermore, in an external validation for the multi-target compound screening, the performance of PortalCG surpassed the rational design from medicinal chemists. Our results also suggest that a differentiable sequence-structure-function deep learning framework, where protein structural information serves as an intermediate layer, could be superior to conventional methodology where predicted protein structures were used for the compound screening. …”
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211
Synthesis, characterization and biological activity of new azo coumarin compounds
Published 2018“…The development of new heterocyclic based azo dye derivatives is becoming the significant attraction of medicinal chemists. Azo compounds consist of at least a conjugated chromophore azo (-N=N-) group in connection with one or more aromatic or heterocyclic systems. …”
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Thesis -
212
Machine learning approaches for computer aided drug discovery
Published 2022“…I explored different topological fingerprint and autoencoder representations for Bayesian optimisation (BO) and showed that BO is a powerful tool to help medicinal chemists to prioritise which new compounds to make for single-target as well as multi-target optimisation. …”
Thesis -
213
Extending the DIDEO ontology to include entities from the natural product drug interaction domain of discourse
Published 2018-05-01“…The Center is creating a public database to help researchers (primarly pharmacologists and medicinal chemists) to share and access data, results, and methods from PK-NPDI studies. …”
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214
Structure-based ligand discovery: elaborating fragment hits in silico
Published 2019“…Hit-to-lead development is often driven by the subjective decisions of medicinal chemists. There is growing interest in developing more objective tools to explore the vastness of chemical space. …”
Thesis