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381
Beyond microarrays: Finding key transcription factors controlling signal transduction pathways
Published 2006-09-01“…<p>Abstract</p> <p>Background</p> <p>Massive gene expression changes in different cellular states measured by microarrays, in fact, reflect just an "echo" of real molecular processes in the cells. …”
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382
Optimization of gene expression microarray protocol for formalin-fixed paraffin-embedded tissues
Published 2016-03-01“…However, there is still no generally accepted, efficient and standardized procedure for microarray analysis of FFPE samples. This paper describes the microarray data presented in our recently accepted to be published article showing a standard protocol from deparaffinization of FFPE tissue sections and RNA extraction to microarray gene expression analysis. …”
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383
Extending the tissue microarray data exchange specification for inclusion of data analysis results
Published 2011-01-01Subjects: Get full text
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384
Cross-platform normalization of microarray and RNA-seq data for machine learning applications
Published 2016-01-01Subjects: Get full text
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385
Impact of the spotted microarray preprocessing method on fold-change compression and variance stability
Published 2011-10-01“…<p>Abstract</p> <p>Background</p> <p>The standard approach for preprocessing spotted microarray data is to subtract the local background intensity from the spot foreground intensity, to perform a log2 transformation and to normalize the data with a global median or a lowess normalization. …”
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386
Eight Differential miRNAs in DN Identified by Microarray Analysis as Novel Biomarkers
Published 2022-03-01Get full text
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387
Deep learning techniques for cancer classification using microarray gene expression data
Published 2022-09-01“…Cancer is one of the top causes of death globally. Recently, microarray gene expression data has been used to aid in cancer’s effective and early detection. …”
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388
Robotic Cell Printing for Constructing Living Yeast Cell Microarrays in Microfluidic Chips
Published 2020-02-01Subjects: Get full text
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389
High-throughput processing and normalization of one-color microarrays for transcriptional meta-analyses
Published 2011-10-01“…<p>Abstract</p> <p>Background</p> <p>Microarray experiments are becoming increasingly common in biomedical research, as is their deposition in publicly accessible repositories, such as Gene Expression Omnibus (GEO). …”
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390
VennMaster: Area-proportional Euler diagrams for functional GO analysis of microarrays
Published 2008-01-01“…<p>Abstract</p> <p>Background</p> <p>Microarray experiments generate vast amounts of data. …”
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391
A temporal precedence based clustering method for gene expression microarray data
Published 2010-01-01“…<p>Abstract</p> <p>Background</p> <p>Time-course microarray experiments can produce useful data which can help in understanding the underlying dynamics of the system. …”
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392
A process for analysis of microarray comparative genomics hybridisation studies for bacterial genomes
Published 2008-01-01“…<p>Abstract</p> <p>Background</p> <p>Microarray based comparative genomic hybridisation (CGH) experiments have been used to study numerous biological problems including understanding genome plasticity in pathogenic bacteria. …”
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393
Prenatal diagnosis and genetic etiology analysis of talipes equinovarus by chromosomal microarray analysis
Published 2023-11-01“…The study aimed to explore the molecular etiology of fetal TE and provide more information for the clinical screening and genetic counseling of TE by Chromosomal Microarray Analysis (CMA). Methods This retrospectively study included 131 fetuses with TE identified by ultrasonography. …”
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394
Single-stranded DNA catalyzes hybridization of PCR-products to microarray capture probes.
Published 2014-01-01“…Since its development, microarray technology has evolved to a standard method in the biotechnological and medical field with a broad range of applications. …”
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395
Simulation and Experimental Study of Laser Processing NdFeB Microarray Structure
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396
KinSNP software for homozygosity mapping of disease genes using SNP microarrays
Published 2010-08-01Subjects: Get full text
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397
Tissue MicroArray (TMA) analysis of normal and persistent <it>Chlamydophila pneumoniae </it>infection
Published 2006-10-01“…</p> <p>Methods</p> <p>We validated the use of tissue microarray (TMA) technology, in combination with immunohistochemistry (IHC), to test antibodies (GroEL, GroES, GspD, Ndk and Pyk) raised against differentially expressed proteins under an interferon-gamma (IFN-γ) induced model of chlamydial persistence.…”
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398
MSIMEP: Predicting microsatellite instability from microarray DNA methylation tumor profiles
Published 2023-03-01“…Considering this together with the fact that MSI-high tumors frequently exhibit a hypermethylated phenotype, herein we developed and validated MSIMEP, a computational tool for predicting MSI status from microarray DNA methylation tumor profiles of colorectal cancer samples. …”
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399
Microarray dataset of Jurkat cells following miR-93 over-expression
Published 2016-09-01“…The dataset presented here represents a microarray experiment of Jurkat cell line over-expressing miR-93 after lentiviral transgenic construct transduction. …”
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400
Very Important Pool (VIP) genes – an application for microarray-based molecular signatures
Published 2008-08-01“…<p>Abstract</p> <p>Background</p> <p>Advances in DNA microarray technology portend that molecular signatures from which microarray will eventually be used in clinical environments and personalized medicine. …”
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