Hypoxic transcription gene profiles under the modulation of nitric oxide in nuclear run on-microarray and proteomics by Dehne Nathalie, Al-Furoukh Natalie, Essler Silke, Igwe Emeka I, Brüne Bernhard

“…<p>Abstract</p> <p>Background</p> <p>Microarray analysis still is a powerful tool to identify new components of the transcriptosome. …”
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Laboratory performance of genome-wide cfDNA for copy number variants as compared to prenatal microarray by Erica Soster, John Tynan, Clare Gibbons, Wendy Meschino, Jenna Wardrop, Eyad Almasri, Stuart Schwartz, Graham McLennan

“…Results This study reviews 701 pregnancies with “high risk” indications for fetal aneuploidy which underwent both genome-wide cfDNA and prenatal microarray. For aneuploidies and CNVs considered ‘in-scope’ for the cfDNA test (CNVs ≥ 7 Mb and select microdeletions), sensitivity and specificity was 93.8% and 97.3% respectively, with positive and negative predictive values of 63.8% and 99.7% as compared to microarray. …”
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Perbandingan CART dan Random Forest untuk Deteksi Kanker berbasis Klasifikasi Data Microarray by Riska Chairunisa, Adiwijaya, Widi Astuti

Subjects: “…kanker, microarray, discrete wavelet transform, classification and regression tree, random forest.…”
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Patterning Large-Scale Nanostructured Microarrays on Coverslip for Sensitive Plasmonic Detection of Aqueous Gliadin Traces by Giuliocesare Casari Bariani, Lan Zhou, Simone Poggesi, Marisa Manzano, Rodica Elena Ionescu

“…With this concern, the present work proposes a rapid and sensitive optical nanostructured microarrays platform for the detection of gliadin using specific anti-gliadin IgG antibodies immobilized on annealed gold nanostructures (AuNPs) obtained after the high annealing process (550 °C) of gold thin films evaporated on commercial glass coverslips. …”
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Transcriptome analysis in non-model species: a new method for the analysis of heterologous hybridization on microarrays by Jouventin Pierre, Chuchana Paul, Forcheron Fabien, de Dinechin Marc, Rey Benjamin, Keime Céline, Degletagne Cyril, Gautier Christian, Duchamp Claude

“…However, although commercial microarrays are available for most common laboratory models, transcriptome analysis in non-traditional model species still remains a challenge. …”
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A Novel Mechanomyography (MMG) Sensor Based on Piezo-Resistance Principle and with a Pyramidic Microarray by Qize Fang, Shuchen Cao, Haotian Qin, Ruixue Yin, Wenjun Zhang, Hongbo Zhang

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Triclustering Discovery Using the <i>δ</i>-Trimax Method on Microarray Gene Expression Data by Titin Siswantining, Noval Saputra, Devvi Sarwinda, Herley Shaori Al-Ash

“…Triclustering analysis has been frequently applied to analyze microarray gene expression data. We proposed the <inline-formula><math xmlns="http://www.w3.org/1998/Math/MathML" display="inline"><semantics><mi>δ</mi></semantics></math></inline-formula>-Trimax method to perform triclustering analysis on microarray gene expression data. …”
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Comparative genomic hybridisation and transcriptome microarray analysis in triple negative breast cancer: An INDIAN study. by Hemangini Vora, Mansi Desai, Ghanshyam Patel, Nupur Patel, Prabhudas Patel

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A Two-Way Proteome Microarray Strategy to Identify Novel Mycobacterium tuberculosis-Human Interactors by Tingming Cao, Lingna Lyu, Hongyan Jia, Jinghui Wang, Fengjiao Du, Liping Pan, Zihui Li, Aiying Xing, Jing Xiao, Yu Ma, Zongde Zhang

Subjects: “…human proteome microarray…”
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Inhibin Alpha Expression in Human Tumors: A Tissue Microarray Study on 12,212 Tumors by Sören Weidemann, Nessar Ahmad Noori, Maximilian Lennartz, Viktor Reiswich, David Dum, Anne Menz, Viktoria Chirico, Claudia Hube-Magg, Christoph Fraune, Ahmed Abdulwahab Bawahab, Christian Bernreuther, Ronald Simon, Till S. Clauditz, Guido Sauter, Andrea Hinsch, Simon Kind, Frank Jacobsen, Stefan Steurer, Sarah Minner, Eike Burandt, Andreas H. Marx, Till Krech, Patrick Lebok, Franziska Büscheck, Doris Höflmayer

“…To comprehensively determine INHA expression in cancer, a tissue microarray containing 15,012 samples from 134 different tumor types and subtypes was analyzed by immunohistochemistry. …”
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Microarray Profile of Long Noncoding RNA and Messenger RNA Expression in a Model of Alzheimer’s Disease by Linlin Wang, Li Zeng, Hailun Jiang, Zhuorong Li, Rui Liu

“…Therefore, in this study, lncRNA microarray was performed on the brain of APP/PS1 mice at different age, widely used as an AD mouse model, and on age-matched wide-type controls. …”
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Comparative Analysis of Romanian and Swiss Bovine Populations Using Whole Genome Sequencing and SNP Microarrays by Alexandru Eugeniu Mizeranschi, Radu Ionel Neamț, Ciprian Valentin Mihali, Vlad Goilean, Mihai Carabaș, Daniela Elena Ilie

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A Reliable, Label Free Quality Control Method for the Production of DNA Microarrays with Clinical Applications by Elisa Chiodi, Francesco Damin, Laura Sola, Lucia Ferraro, Dario Brambilla, M. Selim Ünlü, Marcella Chiari

Subjects: “…DNA microarray…”
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Navigating Tissue Microarray Construction: A Guide for Avoiding Pitfalls and Mastering Key Technical Aspects by Tanvi Jha, Somnath Mahapatra, Preeti Diwaker, Vinod Kumar Arora, Sonal Sharma

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Hydrogel Droplet Microarray for Genotyping Antimicrobial Resistance Determinants in <i>Neisseria gonorrhoeae</i> Isolates by Boris Shaskolskiy, Ilya Kandinov, Dmitry Kravtsov, Alexandra Vinokurova, Sofya Gorshkova, Marina Filippova, Alexey Kubanov, Victoria Solomka, Dmitry Deryabin, Ekaterina Dementieva, Dmitry Gryadunov

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A microarray approach to identify genes involved in seed-pericarp cross-talk and development in peach by Zaffalon Valerio, Ziliotto Fiorenza, Rasori Angela, Tadiello Alice, Botton Alessandro, Trainotti Livio, Bonghi Claudio, Casadoro Giorgio, Ramina Angelo

“…Mesocarp markers were a RD22-like protein, a serin-carboxypeptidase, a senescence related protein and an Aux/IAA, for S1, S2, S3 and S4, respectively.</p> <p>The microarray data, analyzed by using the HORMONOMETER platform, allowed the identification of hormone-responsive genes, some of them putatively involved in seed-pericarp crosstalk. …”
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Protein profiling in systemic sclerosis patients with different pulmonary complications using proteomic antibody microarray by Jing Huang, Honglin Zhu, Sijia Liu, Mengtao Li, Yisha Li, Hui Luo, Xiaoxia Zuo

“…Methods We screened for serum biomarkers using a proteomic antibody microarray that simultaneously assessed 1000 proteins. …”
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Data analysis of high-throughput sequencing and microarray to identify key signatures of microribonucleic acids in glioblastoma by A. A. Pushkin, E. A. Dzenkova, N. N. Timoshkina, D. Yu. Gvaldin

“…A total of 156 glioblastoma samples with mRNA sequencing data, 571 samples with microarray microRNA analysis data, and 15 control samples were analyzed. …”
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Application of high-density DNA resequencing microarray for detection and characterization of botulinum neurotoxin-producing clostridia. by Jessica Vanhomwegen, Nicolas Berthet, Christelle Mazuet, Ghislaine Guigon, Tatiana Vallaeys, Rayna Stamboliyska, Philippe Dubois, Giulia C Kennedy, Stewart T Cole, Valérie Caro, Jean-Claude Manuguerra, Michel-Robert Popoff

“…The high diversity in nucleotide sequence and genetic organization of the gene cluster encoding the BoNT components poses a great challenge for the screening and characterization of BoNT-producing strains.In the present study, we designed and evaluated the performances of a resequencing microarray (RMA), the PathogenId v2.0, combined with an automated data approach for the simultaneous detection and characterization of BoNT-producing clostridia. …”
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Tissue Microarrays to Visualize Influenza D Attachment to Host Receptors in the Respiratory Tract of Farm Animals by Nikoloz Nemanichvili, Alinda J. Berends, Richard W. Wubbolts, Andrea Gröne, Jolianne M. Rijks, Robert P. de Vries, Monique H. Verheije

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