Gene Expression Browser: large-scale and cross-experiment microarray data integration, management, search & visualization by Zhang Ming, Zhang Yudong, Liu Li, Yu Lijuan, Tsang Shirley, Tan Jing, Yao Wenhua, Kang Manjit S, An Yongqiang, Fan Xingming

“…<p>Abstract</p> <p>Background</p> <p>In the last decade, a large amount of microarray gene expression data has been accumulated in public repositories. …”
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Diagnosis of acute myeloid leukaemia on microarray gene expression data using categorical gradient boosted trees by Athanasios Angelakis, Ioanna Soulioti, Michael Filippakis

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Correction: Comparison of Hepatocellular Carcinoma miRNA Expression Profiling as Evaluated by Next Generation Sequencing and Microarray

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A Novel Microbiosensor Microarray for Continuous ex Vivo Monitoring of Gamma-Aminobutyric Acid in Real-Time by Imran Hossain, Chao Tan, Chao Tan, Phillip T. Doughty, Gaurab Dutta, Teresa A. Murray, Shabnam Siddiqui, Leonidas Iasemidis, Prabhu U. Arumugam, Prabhu U. Arumugam

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P743: Uncovering hidden complex structural mechanisms: Conventional karyotype as a complement to chromosomal microarray by Katherine Haines, Deborah Hazard, Billie Carstens, Patricia Trevisan, Peter Brzeskiewicz, Thomas Gilfillan, Hala Nijmeh, Andrea Cortes Fernandez, Chandra Perez-Gill, Mikayla Stoecker, Aaina Kochhar, Mary Haag

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Identification of useful genes from multiple microarrays for ulcerative colitis diagnosis based on machine learning methods by Lin Zhang, Rui Mao, Chung Tai Lau, Wai Chak Chung, Jacky C. P. Chan, Feng Liang, Chenchen Zhao, Xuan Zhang, Zhaoxiang Bian

“…A total of ten eligible microarrays (including 387 UC patients and 139 healthy subjects) were included in this study, specifically with six microarrays (GSE48634, GSE6731, GSE114527, GSE13367, GSE36807, and GSE3629) in the training group and four microarrays (GSE53306, GSE87473, GSE74265, and GSE96665) in the testing group. …”
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Systematic Identification of Protein Targets of Sub5 Using <i>Saccharomyces cerevisiae</i> Proteome Microarrays by Pramod Shah, Chien-Sheng Chen

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Modeling oncogenic signaling in colon tumors by multidirectional analyses of microarray data directed for maximization of analytical reliability. by Magdalena Skrzypczak, Krzysztof Goryca, Tymon Rubel, Agnieszka Paziewska, Michal Mikula, Dorota Jarosz, Jacek Pachlewski, Janusz Oledzki, Jerzy Ostrowski

“…Several of them were also selected from the raw microarray data of 2 recently published studies (GSE4183 and GSE8671). …”
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A method for an efficient formation of giant vesicles of neutral phospholipids in microarrays using a microplotter equipment by Juan R Avendaño-Gomez, Obed A Solis-Gonzalez, Haydee González-Martínez, Miguel A Vega-Cuellar

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Separation and Analysis of Adherent and Non-Adherent Cancer Cells Using a Single-Cell Microarray Chip by Shohei Yamamura, Eriko Yamada, Fukiko Kimura, Kumiko Miyajima, Hajime Shigeto

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Meta-analysis of multiple microarray datasets reveals a common gene signature of metastasis in solid tumors by Hilsenbeck Susan G, Daves Marla H, Lau Ching C, Man Tsz-Kwong

“…<p>Abstract</p> <p>Background</p> <p>Metastasis is the number one cause of cancer deaths. Expression microarrays have been widely used to study metastasis in various types of cancer. …”
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Design, manufacture, and application of DNA microarrays to study gene expression phenotypes of lysine-producing Corynebacterium glutamicum by Roberge, Christopher (Christopher M.)

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Time-series analyses of Monterey Bay coastal microbial picoplankton using a ‘genome proxy’ microarray by Rich, Virginia I., Pham, Vinh D., Eppley, John Marmaduke, Shi, Yanmei, DeLong, Edward

“…To investigate the temporal, spatial and phylogenetic resolution of marine microbial community structure and variability, we designed and expanded a genome proxy array (an oligonucleotide microarray targeting marine microbial genome fragments and genomes), evaluated it against metagenomic sequencing, and applied it to time-series samples from the Monterey Bay. …”
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ExpressionPlot: a web-based framework for analysis of RNA-Seq and microarray gene expression data by Maniatis, Tom, Friedman, Brad Aaron

“…RNA-Seq and microarray platforms have emerged as important tools for detecting changes in gene expression and RNA processing in biological samples. …”
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A combinatorial cell-laden gel microarray for inducing osteogenic differentiation of human mesenchymal stem cells by Dolatshahi-Pirouz, Alireza, Nikkhah, Mehdi, Gaharwar, Akhilesh K., Hashmi, Basma, Guermani, Enrico, Aliabadi, Hamed, Camci-Unal, Gulden, Ferrante, Thomas C., Foss, Morten, Ingber, Donald E., Khademhosseini, Ali

“…Here, we describe a new platform to address this challenge by utilizing a robotic microarray spotter for testing stem cell fates inside various miniaturized cell-laden gels in a systematic manner. …”
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Design of whole-genome tiling microarrays for staphylococcus aureus NCTC 8325 and pseudomonas aeruginosa PA01 by Tan, Steffe Jie Ing.

“…Optimal design of microarray probes has a direct impact on the reliability of microarray results. …”
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Multi-modal optical microscopy image analysis and matching techniques for spatially encoded bead-based microarrays by Datta, Abhik

“…Bead encoding is a key problem central to all multiplexed bead-based microarrays. Most existing bead-based microarrays require complicated and costly bead fabrication and/or sophisticated bead decoding hardware to achieve high multiplexing. …”
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Cancer recognition from DNA microarray gene expression data using averaged one-dependence estimators by Shoon , Lei Win, Htike@Muhammad Yusof, Zaw Zaw, Yusof, Faridah, Ibrahim Ali , Noorbatcha

“…The microarray technology allows researchers to examine the expression of thousands of genes simultaneously. …”
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Real-Time Monitoring of the Dephosphorylating Activity of Protein Tyrosine Phosphatases Using Microarrays with 3-Nitrophosphotyrosine Substrates by van Ameijde, J, Overvoorde, J, Knapp, S, den Hertog, J, Ruijtenbeek, R, Liskamp, R

“…Herein, a new real-time, dynamic protein tyrosine phosphatase (PTP) substrate microarray assay measuring product formation is described. …”

Improved detection of nasopharyngeal cocolonization by multiple pneumococcal serotypes by use of latex agglutination or molecular serotyping by microarray. by Turner, P, Hinds, J, Turner, C, Jankhot, A, Gould, K, Bentley, S, Nosten, F, Goldblatt, D

“…Cocolonization detection rates were similar between microarray and sweep, but the microarray identified the greatest number of serotypes. …”