Inference and synergy networks for prediction of breast cancer metastasis / by Farzana Kabir Ahmad, 1980-, Safaai Deris, supervisor, Nor Hayati Othman, Fakulti Sains Komputer dan Sistem Maklumat

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Inference and synergy networks for prediction of breast cancer metastasis [electronic resource] / by Farzana Kabir Ahmad, 1980-

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Imputting missing DNA microarray data using nearest neighbour (NN) in least square data imputation algorithm for survival analysis [electronic resource] / by Cham, Wei Lun, 1986-

Chromosomal Microarray Analysis Identifies a Novel SALL1 Deletion, Supporting the Association of Haploinsufficiency with a Mild Phenotype of Townes–Brocks Syndrome by Anna Maria Innoceta, Giulia Olivucci, Giulia Parmeggiani, Emanuela Scarano, Antonella Pragliola, Claudio Graziano

“…We review the clinical findings of known individuals with <i>SALL1</i> deletions and point out that the overall phenotype is milder, especially when compared with individuals who carry the recurrent p.Arg276Ter mutation, but with a possible higher risk of developmental delay. Chromosomal microarray analysis is still a valuable tool in the identification of atypical/mild TBS cases, which are likely underestimated.…”
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Protective Actions of α-Tocopherol on Cell Membrane Lipids of Paraquat-Stressed Human Astrocytes Using Microarray Technology, MALDI-MS and Lipidomic Analysis by Laura Sánchez-Sánchez, Roberto Fernández, Maria Dolores Ganfornina, Egoitz Astigarraga, Gabriel Barreda-Gómez

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In silico enhanced restriction enzyme based methylation analysis of the human glioblastoma genome using Agilent 244K CpG Island microarrays by Anh Tran, Anh Tran, Cameron Escovedo, Cameron Escovedo, Justine Migdall-Wilson, Arthur Chou, Weidong Chen, Weidong Chen, Timothy Cloughesy, Timothy Cloughesy, Stanley Nelson, Albert Lai, Albert Lai

“…Restriction enzyme based approaches have been widely utilized for methylation profiling of cancer genomes and will continue to have importance in combination with higher density microarrays. With the availability of the human genome sequence and microarray probe sequences, these approaches can be readily characterized and optimized via in silico modeling. …”
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Comprehensive miRNA and DNA Microarray Analyses Reveal the Response of Hepatic miR-203 and Its Target Gene to Protein Malnutrition in Rats by Kaoru Takahashi, Huijuan Jia, Shoko Takahashi, Hisanori Kato

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Integrated analysis of multiple microarray studies to establish differential diagnostic models of Crohn’s disease and ulcerative colitis based on a metalloproteinase-associated module by Jiang Deng, Jiang Deng, Ning Zhao, Ning Zhao, Li-ping Lv, Li-ping Lv, Ping Ma, Ping Ma, Yang-yang Zhang, Yang-yang Zhang, Jin-bo Xu, Jin-bo Xu, Xi-peng Zhou, Xi-peng Zhou, Zi-an Chen, Zi-an Chen, Yan-yu Zhang, Yan-yu Zhang

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Microarray analysis reveals increased transcriptional repression and reduced metabolic activity but not major changes in the core apoptotic machinery during maturation of sympathetic neurons by Mikk eRaba, Jaan ePalgi, Maria eLehtivaara, Urmas eArumäe, Urmas eArumäe

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Microarray data and pathway analyses of peripheral blood mononuclear cells from healthy subjects after a three weeks grape-rich diet by Rosa Anna Milella, Marica Gasparro, Fiammetta Alagna, Maria Francesca Cardone, Silvia Rotunno, Concetta Tiziana Ammollo, Fabrizio Semeraro, Apollonia Tullo, Flaviana Marzano, Domenico Catalano, Donato Antonacci, Mario Colucci, Domenica D'Elia

“…Using Human Gene Expression Microarrays (Agilent) technologies, we investigated changes of the level of gene expression in peripheral blood mononuclear cells of healthy subjects after 21 days of fresh table grape-rich diet and after an additional 28-day washout. …”
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Circulating Total Extracellular Vesicles Cargo Are Associated with Age-Related Oxidative Stress and Susceptibility to Cardiovascular Diseases: Exploratory Results from Microarray Data by Laura Reck Cechinel, Rachael Ann Batabyal, Giana Blume Corssac, Madeleine Goldberg, Brennan Harmon, Virgínia Mendes Russo Vallejos, Gisele E. Bruch, André Ricardo Massensini, Adriane Belló-Klein, Alex Sander da Rosa Araujo, Robert J. Freishtat, Ionara Rodrigues Siqueira

“…MicroRNA isolation and microarray expression analysis were performed on EVPs to determine the predicted regulation of targeted mRNAs. …”
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LM-GlycomeAtlas Ver. 1.0: A Novel Visualization Tool for Lectin Microarray-Based Glycomic Profiles of Mouse Tissue Sections by Chiaki Nagai-Okatani, Kiyoko F Aoki-Kinoshita, Shuichi Kakuda, Misugi Nagai, Kozue Hagiwara, Katsue Kiyohara, Noriaki Fujita, Yoshinori Suzuki, Takashi Sato, Kiyohiko Angata, Atsushi Kuno

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Microarray Profile of Circular RNAs Identifies hsa_circ_0001583 as A New Circular RNA Biomarker for Breast Cancer: A Retrospective Study by Min Zheng, Wei-Hua Cai, Mou-Feng Wang, Yu-Jie Deng, Ling-ling Huang, Yong-Jin Cao

“…The circRNA expression profiles were detected via microarray and validated by real-time quantitative polymerase chain reaction (PCR).Results: The differentially expressed circRNAs in tested samples were screened and analyzed by using human circRNAmicroarray. …”
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Peptide microarray-based identification of dormancy-associated Mycobacterium tuberculosis antigens inducing immune responses among latent tuberculosis infection individuals in Thailand by Jariya Hanthamrongwit, Panicha Aruvornlop, Chutiphon Saelee, Nattiya Wanta, Passarun Poneksawat, Phyu Thwe Soe, Soe Paing Kyaw, Prasong Khaenam, Saradee Warit, Davide Valentini, Surakameth Mahasirimongkol, Panadda Dhepakson, Sakulrat Soonthornchartrawat, Patchanee Chootong, Chaniya Leepiyasakulchai

“…In this study, we identified the potential targets for this vaccine in a high TB burden country, Thailand. Peptide microarray was applied to gauge IgA and IgG antibodies specific to 16,730 linear epitopes of 52 dormancy-associated Mycobacterium tuberculosis (M. tb) proteins in three study groups: active tuberculosis (ATB), latent tuberculosis infection (LTBI) and endemic healthy control (EHC). …”
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Meta-analysis of microarray and RNAseq data reveal OsbZIP52 to mediate salt stress responses in sensitive, tolerant and halophyte rice varieties by Dipankor Chatterjee, Mohammad Umer Sharif Shohan, Nishat Tamanna, Zeba I. Seraj

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Microarray and Functional Pathway Analyses Revealed Significantly Elevated Gene Expressions Associated with Metabolic Resistance to Oxamyl (Vydate) in <i>Lygus lineolaris</i> by Yu-Cheng Zhu, Yuzhe Du, Xiaofen Liu, Maribel Portilla, Jian Chen, Yanhua Wang

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Itraconazole treatment of primary malignant melanoma of the vagina evaluated using positron emission tomography and tissue cDNA microarray: a case report by Kayo Inoue, Hiroshi Tsubamoto, Roze Isono-Nakata, Kazuko Sakata, Nami Nakagomi

“…The biopsied specimens obtained on days 1, 13, and 30 were subjected to cDNA microarray analysis, which revealed a 100-fold downregulation in the transcription of four genes: STATH, EEF1A2, TTR, and CDH2. …”
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Correction: Serological Profiling of a Candida albicans Protein Microarray Reveals Permanent Host-Pathogen Interplay and Stage-Specific Responses during Candidemia

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The effect of consumption of Agaricus blazei edible mushroom on caspase 2 gene expression in hepatitis C patients using system biology and microarray data by Alireza Panahi, Gholamreza Dadashi Oranj

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Investigation of Pathogenesis of H1N1 Influenza Virus and Swine Streptococcus suis Serotype 2 Co-Infection in Pigs by Microarray Analysis. by Xian Lin, Canhui Huang, Jian Shi, Ruifang Wang, Xin Sun, Xiaokun Liu, Lianzhong Zhao, Meilin Jin

“…A comprehensive gene expression profiling using a microarray approach was performed to investigate the global host responses of swine lungs against the swine H1N1 infection, SS2 infection, co-infection, and phosphate-buffered saline control. …”
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