SNARE-CNN : a 2D convolutional neural network architecture to identify SNARE proteins from high-throughput sequencing data by Le, Nguyen Quoc Khanh, Nguyen, Van-Nui

Subjects: Get full text

Simple adjustment of the sequence weight algorithm remarkably enhances PSI-BLAST performance by Toshiyuki Oda, Kyungtaek Lim, Kentaro Tomii

Subjects: Get full text

LGC-DBP: the method of DNA-binding protein identification based on PSSM and deep learning by Yiqi Zhu, Ailun Sun

Subjects: Get full text

Sugar Type Discrimination in O-glycosylation Based on Protein Primary Sequences by Kenji ETCHUYA, Yuri MUKAI

Subjects: Get full text

Identifying Antifreeze Proteins Based on Key Evolutionary Information by Shanwen Sun, Hui Ding, Donghua Wang, Shuguang Han

Subjects: Get full text

EnsembleDL-ATG: Identifying autophagy proteins by integrating their sequence and evolutionary information using an ensemble deep learning framework by Lezheng Yu, Yonglin Zhang, Li Xue, Fengjuan Liu, Runyu Jing, Jiesi Luo

Subjects: Get full text

An Improved Deep Forest Model for Predicting Self-Interacting Proteins From Protein Sequence Using Wavelet Transformation by Zhan-Heng Chen, Zhan-Heng Chen, Li-Ping Li, Zhou He, Ji-Ren Zhou, Yangming Li, Leon Wong, Leon Wong

Subjects: Get full text

Identifying Membrane Protein Types Based on Lifelong Learning With Dynamically Scalable Networks by Weizhong Lu, Weizhong Lu, Weizhong Lu, Jiawei Shen, Yu Zhang, Hongjie Wu, Hongjie Wu, Yuqing Qian, Xiaoyi Chen, Qiming Fu

Subjects: Get full text

Prediction of Drug-Target Interactions by Ensemble Learning Method From Protein Sequence and Drug Fingerprint by Xinke Zhan, Zhu-Hong You, Jinfan Cai, Liping Li, Changqing Yu, Jie Pan, Jiangkun Kong

Subjects: Get full text

Detection of Interactions between Proteins by Using Legendre Moments Descriptor to Extract Discriminatory Information Embedded in PSSM by Yan-Bin Wang, Zhu-Hong You, Li-Ping Li, Yu-An Huang, Hai-Cheng Yi

Subjects: Get full text

VTP-Identifier: Vesicular Transport Proteins Identification Based on PSSM Profiles and XGBoost by Yue Gong, Benzhi Dong, Zixiao Zhang, Yixiao Zhai, Bo Gao, Tianjiao Zhang, Jingyu Zhang

Subjects: Get full text

Improved Prediction of Protein-Protein Interactions Using Descriptors Derived From PSSM via Gray Level Co-Occurrence Matrix by Hui-Juan Zhu, Zhu-Hong You, Wei-Lei Shi, Shou-Kun Xu, Tong-Hai Jiang, Li-Hua Zhuang

Subjects: Get full text

Prediction of Drug–Target Interactions by Combining Dual-Tree Complex Wavelet Transform with Ensemble Learning Method by Jie Pan, Li-Ping Li, Zhu-Hong You, Chang-Qing Yu, Zhong-Hao Ren, Yao Chen

Subjects: Get full text

Prediction of Protein–Protein Interactions in Arabidopsis, Maize, and Rice by Combining Deep Neural Network With Discrete Hilbert Transform by Jie Pan, Li-Ping Li, Zhu-Hong You, Chang-Qing Yu, Zhong-Hao Ren, Yong-Jian Guan

Subjects: Get full text

Subcellular location prediction of apoptosis proteins using two novel feature extraction methods based on evolutionary information and LDA by Lei Du, Qingfang Meng, Yuehui Chen, Peng Wu

Subjects: Get full text

SNARE-CNN: a 2D convolutional neural network architecture to identify SNARE proteins from high-throughput sequencing data by Nguyen Quoc Khanh Le, Van-Nui Nguyen

Subjects: “…Position specific scoring matrix…”
Get full text

PredT4SE-Stack: Prediction of Bacterial Type IV Secreted Effectors From Protein Sequences Using a Stacked Ensemble Method by Yi Xiong, Qiankun Wang, Junchen Yang, Xiaolei Zhu, Dong-Qing Wei

Subjects: Get full text

Identifying Neuropeptides via Evolutionary and Sequential Based Multi-Perspective Descriptors by Incorporation With Ensemble Classification Strategy by Shahid Akbar, Heba G. Mohamed, Hashim Ali, Aamir Saeed, Aftab Ahmed Khan, Sarah Gul, Ashfaq Ahmad, Farman Ali, Yazeed Yasin Ghadi, Muhammad Assam

Subjects: Get full text

iScore: An MPI supported software for ranking protein–protein docking models based on a random walk graph kernel and support vector machines by Nicolas Renaud, Yong Jung, Vasant Honavar, Cunliang Geng, Alexandre M.J.J. Bonvin, Li C. Xue

Subjects: Get full text

ET-GRU: using multi-layer gated recurrent units to identify electron transport proteins by Nguyen Quoc Khanh Le, Edward Kien Yee Yapp, Hui-Yuan Yeh

Subjects: Get full text