Drug perturbation gene set enrichment analysis (dpGSEA): a new transcriptomic drug screening approach by Mike Fang, Brian Richardson, Cheryl M. Cameron, Jean-Eudes Dazard, Mark J. Cameron

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MGSEA – a multivariate Gene set enrichment analysis by Khong-Loon Tiong, Chen-Hsiang Yeang

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A strategy for evaluating pathway analysis methods by Chenggang Yu, Hyung Jun Woo, Xueping Yu, Tatsuya Oyama, Anders Wallqvist, Jaques Reifman

Subjects: “…Gene set enrichment analysis…”
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Improving the power of gene set enrichment analyses by Joanna Roder, Benjamin Linstid, Carlos Oliveira

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Research Note: Snapshot of the transcriptome via RNA sequencing in the ileum of broiler chickens fed subtherapeutic concentrations of avilamycin by Silvia Fibi-Smetana, Candida Vaz, Jeremy Le Coz, Suzana Ilic, Roger Berrios, Gerd Schatzmayr, Vivek Tanavde, Bertrand Grenier

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Functions of retinal astrocytes and Müller cells in mammalian myopia by Xuhong Zhang, Xin Yu, Yingying Wen, Le Jin, Liyue Zhang, Hong Zhu, Dongyan Zhang, Chen Xie, Dongyu Guo, Jianping Tong, Ye Shen

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Analysis of Gene Expression in Human Dermal Fibroblasts Treated with Senescence-Modulating COX Inhibitors by Jeong A. Han, Jong-Il Kim

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Nutrient Deficiencies Impact on the Cellular and Metabolic Responses of Saxitoxin Producing <i>Alexandrium minutum</i>: A Transcriptomic Perspective by Muhamad Afiq Akbar, Nurul Yuziana Mohd Yusof, Gires Usup, Asmat Ahmad, Syarul Nataqain Baharum, Hamidun Bunawan

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Temporal progression of gene regulation of peripheral white blood cells explains gender dimorphism of critically ill patients after trauma by Amol Kolte, Rainer König

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Immune landscape of hepatocellular carcinoma: The central role of TP53-inducible glycolysis and apoptosis regulator by Qiu Lingbing, Ma Tianyi, Guo Yunmiao, Chen Jugao

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Prospective association of the infant gut microbiome with social behaviors in the ECHO consortium by Hannah E. Laue, Kevin S. Bonham, Modupe O. Coker, Yuka Moroishi, Wimal Pathmasiri, Susan McRitchie, Susan Sumner, Anne G. Hoen, Margaret R. Karagas, Vanja Klepac-Ceraj, Juliette C. Madan, program collaborators for Environmental influences on Child Health Outcomes

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A gene pathway enrichment method based on improved TF-IDF algorithm by Shutan Xu, Yinhui Leng, Guofu Feng, Chenjing Zhang, Ming Chen

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Comprehensive analysis reveals signal and molecular mechanism of mitochondrial energy metabolism pathway in pancreatic cancer by Hong Yang, Ye Cui, YuMing Zhu

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Gene expression analysis of microtubule affinity-regulating kinase 2 in non-small cell lung cancer by Erin A. Marshall, Kevin W. Ng, Christine Anderson, Roland Hubaux, Kelsie L. Thu, Wan L. Lam, Victor D. Martinez

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DhuFAP: a platform for gene functional analysis in Dendrobium huoshanense by Qiaoqiao Xiao, Qi Pan, Jun Li, Jinqiang Zhang, Jiaotong Yang

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Overexpression of TCERG1 as a prognostic marker in hepatocellular carcinoma: A TCGA data-based analysis by Pan Yang, Huaifeng Liu, Yan Li, Qunwei Gao, Xin Chen, Junyan Chang, Yangyang Li, Shuran Chen, Rui Dong, Huazhang Wu, Changqing Liu, Gaofeng Liu

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Identification of Four Immune Subtypes in Bladder Cancer Based on Immune Gene Sets by Chaozhi Tang, Jiakang Ma, Xiuli Liu, Zhengchun Liu

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Gene set enrichment analysis indicates convergence in the mTOR signalling pathway between syndromic and non-syndromic autism by Victor Gustavo Oliveira Evangelho, Murilo Lamim Bello, Helena Carla Castro, Marcia Rodrigues Amorim

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Discerning Endoscopic Severity of Inflammatory Bowel Disease by Scoping the Peripheral Blood Transcriptome by Jan Söderman, Sven Almer

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Identification of ferroptosis-related genes in male mice with sepsis-induced acute lung injury based on transcriptome sequencing by Wen Hu, Zhen Wu, Mei Zhang, Shilin Yu, Xiaohua Zou

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