MethylSeqLogo: DNA methylation smart sequence logos by Fei-Man Hsu, Paul Horton

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The evaluation of transcription factor binding site prediction tools in human and Arabidopsis genomes by Dinithi V. Wanniarachchi, Sameera Viswakula, Anushka M. Wickramasuriya

Subjects: “…Transcription factor binding sites…”
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Journal Watch: our panel of experts highlight the most important research articles across the spectrum of topics relevant to the field of melanoma management by Robert V Rawson, Teresa Bailey, Andrew J Colebatch, Peter Ferguson

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Elucidating the CodY regulon in Staphylococcus aureus USA300 substrains TCH1516 and LAC by Ye Gao, Saugat Poudel, Yara Seif, Zeyang Shen, Bernhard O. Palsson

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Data-driven projections of candidate enhancer-activating SNPs in immune regulation by Markus Hoffmann, Tiago Vaz, Shreeti Chhatrala, Lothar Hennighausen

Subjects: “…Creation of new transcription factor binding sites…”
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Human-genome single nucleotide polymorphisms affecting transcription factor binding and their role in pathogenesis by E. V. Antontseva, A. O. Degtyareva, E. E. Korbolina, I. S. Damarov, T. I. Merkulova

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Genetic Modulation of the GLUT1 Transporter Expression—Potential Relevance in Complex Diseases by Anna Kulin, Nóra Kucsma, Balázs Bohár, Botond Literáti-Nagy, László Korányi, Judit Cserepes, Anikó Somogyi, Balázs Sarkadi, Edit Szabó, György Várady

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Computer analysis of co-localization of transcription factor binding sites in genome by ChIP-seq data by A. I. Dergilev, A. M. Spitsina, I. V. Chadaeva, A. V. Svichkarev, F. M. Naumenko, E. V. Kulakova, E. R. Galieva, E. E. Vityaev, M. Chen, Y. L. Orlov

Subjects: “…transcription factor binding sites…”
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Modeling the cis-regulatory modules of genes expressed in developmental stages of Drosophila melanogaster by Yosvany López, Alexis Vandenbon, Akinao Nose, Kenta Nakai

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Application of alternative <i>de novo</i> motif recognition models for analysis of structural heterogeneity of transcription factor binding sites: a case study of FOXA2 binding sit... by A. V. Tsukanov, V. G. Levitsky, T. I. Merkulova

Subjects: “…transcription factor binding sites (tfbs)…”
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Profiling conserved transcription factor binding motifs in Phaseolus vulgaris through comparative genomics by Liudmyla Kondratova, C. Eduardo Vallejos, Ana Conesa

Subjects: “…Transcription factor binding sites conservation…”
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Integrative computational analyses implicate regulatory genomic elements contributing to spina bifida by Paul Wolujewicz, Vanessa Aguiar-Pulido, Gaurav Thareja, Karsten Suhre, Olivier Elemento, Richard H. Finnell, M. Elizabeth Ross

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Disease-associated genetic variants in the regulatory regions of human genes: mechanisms of action on transcription and genomic resources for dissecting these mechanisms by E. V. Ignatieva, E. A. Matrosova

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COMPUTER-ASSISTED STUDY OF THE REGULATION OF EUKARYOTIC GENE TRANSCRIPTION ON THE BASE OF DATA ON CHROMATIN SEQUENCING AND PRECIPITATION by Yu. L. Orlov

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Position-specific evolution in transcription factor binding sites, and a fast likelihood calculation for the F81 model by Pavitra Selvakumar, Rahul Siddharthan

Subjects: “…transcription factor binding site…”
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Strong expression of Cas9 under a new 3′-truncated TEF1α promoter enhances genome editing in Yarrowia lipolytica by Benjamin Ouellet, A.M. Abdel-Mawgoud

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Comprehensive analysis of transcription factor binding sites and expression profiling of rice pathogenesis related genes (OsPR1) by Diksha Kumari, Bishun Deo Prasad, Padmanabh Dwivedi, Sangita Sahni, Mankesh Kumar, Saud Alamri, Muhammad Faheem Adil, Khaled A. Alakeel

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A preliminary computational outputs versus experimental results: Application of sTRAP, a biophysical tool for the analysis of SNPs of transcription factor‐binding sites by Shirin Moradifard, Reza Saghiri, Parastoo Ehsani, Fatemeh Mirkhani, Mina Ebrahimi‐Rad

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LASAGNA-Search: an integrated web tool for transcription factor binding site search and visualization by Chih Lee, Chun-Hsi Huang

Subjects: “…transcription factor binding site…”
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Investigation of glutathione transferases at the gene regulation level in flufenacet resistant black-grass populations (Alopecurus myosuroides Huds.) by Parcharidou. Evlampia, Dücker, Rebecka, Beffa, Roland

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