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Alternative splicing in the DBD linker region of p63 modulates binding to DNA and iASPP in vitro
Published 2025“…Moreover, the concomitant loss of the charged amino acids in the alternatively spliced version decreases the affinity of p63 to its cognate DNA element two- to threefold. mRNAs encoding full-length p63, as well as its alternatively spliced version, are present in all tissues that we investigated, albeit in differing ratios. …”
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Persistent spectral hypergraph based machine learning (PSH-ML) for protein-ligand binding affinity prediction
Published 2022“…We test our PSH-GBT model on three most commonly used datasets, including PDBbind-2007, PDBbind-2013 and PDBbind-2016. Our results, for all these databases, are better than all existing machine learning models with traditional molecular descriptors, as far as we know.…”
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Journal Article -
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Structural analysis of protein tyrosine phosphatase 1B reveals potentially druggable allosteric binding sites
Published 2020Get full text
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Characterizing the conformational landscape of MDM2-binding p53 peptides using molecular dynamics simulations
Published 2018“…The conformational landscapes of p53 peptide variants and phage derived peptide (12/1) variants, all known to bind to MDM2, are studied using hamiltonian replica exchange molecular dynamics simulations. …”
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Journal Article -
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Determining the feasibility of a full-scale randomised controlled trial evaluating rehabilitation for people after acute patellar dislocation
Published 2024“…This suggests that the low retention may have been for reasons other than the outcome measurement instruments and follow-up methods used.</p> <p>The main finding of this thesis was that a full-scale RCT evaluating rehabilitation is feasible. …”
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Barriers and enablers for accessing rehabilitation services: findings from the rehabilitation choices study, part 1—healthcare professionals' perspectives
Published 2024“…They worked with the study team to codesign the recruitment strategy, participant-facing communications, the interview discussion guide, and the approach to the conduct of activities with participants and in the interpretation and contextualization of findings and all were involved in writing this manuscript.…”
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Regulation of mRNA abundance by polypyrimidine tract-binding protein-controlled alternate 5′ splice site choice
Published 2014“…Here we report that polypyrimidine tract-binding protein 1 (Ptbp1/PTB/hnRNP-I) controls alternate 5′ and 3′ splice site (5′ss and 3′ss) usage in a large set of mammalian transcripts. …”
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Maximizing the performance of badminton athletes through core strength training: Unlocking their full potential using machine learning (ML) modeling
Published 2024“…The core muscles in the abdominal, back, and hip regions provide stability, enable efficient power transfer between the upper and lower body, and allow for rapid changes in direction - all crucial components for success in badminton. …”
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The SARS-CoV-2 nucleocapsid protein interferes with the full enzymatic activation of UPF1 and its interaction with UPF2
Published 2025Journal article -
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Multiscale topological indices for the quantitative prediction of SARS CoV-2 binding affinity change upon mutations
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Journal Article -
53
Using knowledge translation to support the use of evaluation findings: A case study of the linda mama free maternity program in Kenya
Published 2024“…Participants reported that this approach made aware them of the gaps in implementation and motivated them to realise the full potential of the Linda Mama program. Using KT, especially when evaluating and refining the implementation of complex health programs with multiple stakeholders, is useful in improving the uptake of evaluation findings. …”
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Neural radiance selector: find the best 2D representations of 3D data for CLIP based 3D tasks
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Curvature sensing amphipathic helix in the C-terminus of RTNLB13 is conserved in all endoplasmic reticulum shaping reticulons in Arabidopsis thaliana
Published 2021“…The reticulon family of integral membrane proteins are conserved across all eukaryotes and typically localize to the endoplasmic reticulum (ER), where they are involved in generating highly-curved tubules. …”
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Simulation on window's energy efficiency using EnergyPlus (Performing simulation on selected windows to find the most energy efficient window for residential housing)
Published 2013“…Seven types of glazing system were selected to find out which type of glazing system is the most energy efficient window. …”
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Final Year Project (FYP) -
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A conserved arginine in NS5 binds genomic 3' stem-loop RNA for primer-independent initiation of flavivirus RNA replication
Published 2022“…We show that DENV2 NS5 arginine 888, located within the carboxy-terminal 18 residues, is completely conserved in all flaviviruses and interacts specifically with the top-loop of 3'SL in the 3'UTR which contains the pentanucleotide 5'-CACAG-3' previously shown to be critical for flavivirus RNA replication. …”
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Are all renewable energy sources the same? a comparative analysis of public perceptions and preferences for renewable energy types in Southeast Asian cities
Published 2024“…This is despite the fact that many of these issues are closely interlinked with and would be exacerbated by climate change. Furthermore, the findings suggest that solar energy is the most preferred renewable source across all urban areas surveyed. …”
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